RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
CKAP5-209ENST00000528593 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
CKAP5-209ENST00000528593 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
CKAP5-209ENST00000528593 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
CKAP5-209ENST00000528593 FOXD1Q16676 465 aa17.96■□□□□ 0.47
CKAP5-209ENST00000528593 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
CKAP5-209ENST00000528593 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
CKAP5-209ENST00000528593 ADRA2BP18089 450 aa16.98■□□□□ 0.31
CKAP5-209ENST00000528593 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
CKAP5-209ENST00000528593 MSH5O43196 834 aa16.68■□□□□ 0.26
CKAP5-209ENST00000528593 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
CKAP5-209ENST00000528593 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
CKAP5-209ENST00000528593 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
CKAP5-209ENST00000528593 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
CKAP5-209ENST00000528593 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CKAP5-209ENST00000528593 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
CKAP5-209ENST00000528593 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
CKAP5-209ENST00000528593 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
CKAP5-209ENST00000528593 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
CKAP5-209ENST00000528593 KCNA4P22459 653 aa14.81□□□□□ -0.04
CKAP5-209ENST00000528593 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
CKAP5-209ENST00000528593 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
CKAP5-209ENST00000528593 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
CKAP5-209ENST00000528593 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
CKAP5-209ENST00000528593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.145e-9■□□□□ 8.4
CKAP5-209ENST00000528593 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
CKAP5-209ENST00000528593 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
CKAP5-209ENST00000528593 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
CKAP5-209ENST00000528593 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
CKAP5-209ENST00000528593 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
CKAP5-209ENST00000528593 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
CKAP5-209ENST00000528593 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
CKAP5-209ENST00000528593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
CKAP5-209ENST00000528593 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
CKAP5-209ENST00000528593 ZBTB22O15209 634 aa13.66□□□□□ -0.22
CKAP5-209ENST00000528593 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
CKAP5-209ENST00000528593 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
CKAP5-209ENST00000528593 APLP2Q06481 763 aa13.6□□□□□ -0.23
CKAP5-209ENST00000528593 CAPN15O75808 1086 aa13.55□□□□□ -0.24
CKAP5-209ENST00000528593 DSG3P32926 999 aa13.48□□□□□ -0.25
CKAP5-209ENST00000528593 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
CKAP5-209ENST00000528593 NISCHQ9Y2I1 1504 aa13.43□□□□□ -0.26
CKAP5-209ENST00000528593 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
CKAP5-209ENST00000528593 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
CKAP5-209ENST00000528593 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
CKAP5-209ENST00000528593 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
CKAP5-209ENST00000528593 ABCB7O75027 752 aa13.26□□□□□ -0.29
CKAP5-209ENST00000528593 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
CKAP5-209ENST00000528593 POLA2Q14181 598 aa13.15□□□□□ -0.3
CKAP5-209ENST00000528593 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
CKAP5-209ENST00000528593 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
CKAP5-209ENST00000528593 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
CKAP5-209ENST00000528593 FBLN2P98095 1184 aa12.75□□□□□ -0.37
CKAP5-209ENST00000528593 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
CKAP5-209ENST00000528593 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
CKAP5-209ENST00000528593 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
CKAP5-209ENST00000528593 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
CKAP5-209ENST00000528593 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
CKAP5-209ENST00000528593 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
CKAP5-209ENST00000528593 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
CKAP5-209ENST00000528593 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
CKAP5-209ENST00000528593 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
CKAP5-209ENST00000528593 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
CKAP5-209ENST00000528593 POTEHQ6S545 545 aa12.35□□□□□ -0.43
CKAP5-209ENST00000528593 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
CKAP5-209ENST00000528593 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
CKAP5-209ENST00000528593 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
CKAP5-209ENST00000528593 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■■■ 30
CKAP5-209ENST00000528593 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
CKAP5-209ENST00000528593 PROM2Q8N271 834 aa12.17□□□□□ -0.46
CKAP5-209ENST00000528593 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
CKAP5-209ENST00000528593 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
CKAP5-209ENST00000528593 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
CKAP5-209ENST00000528593 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
CKAP5-209ENST00000528593 FKBP8Q14318 412 aa11.99□□□□□ -0.49
CKAP5-209ENST00000528593 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
CKAP5-209ENST00000528593 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
CKAP5-209ENST00000528593 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
CKAP5-209ENST00000528593 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
CKAP5-209ENST00000528593 HAX1O00165 279 aa11.8□□□□□ -0.52
CKAP5-209ENST00000528593 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
CKAP5-209ENST00000528593 EVX2Q03828 476 aa11.75□□□□□ -0.53
CKAP5-209ENST00000528593 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
CKAP5-209ENST00000528593 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
CKAP5-209ENST00000528593 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
CKAP5-209ENST00000528593 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
CKAP5-209ENST00000528593 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
CKAP5-209ENST00000528593 MIER1Q8N108 512 aa11.62□□□□□ -0.55
CKAP5-209ENST00000528593 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
CKAP5-209ENST00000528593 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
CKAP5-209ENST00000528593 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
CKAP5-209ENST00000528593 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
CKAP5-209ENST00000528593 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
CKAP5-209ENST00000528593 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
CKAP5-209ENST00000528593 GABBR2O75899 941 aa11.5□□□□□ -0.57
CKAP5-209ENST00000528593 CLCN6P51797 869 aa11.49□□□□□ -0.57
CKAP5-209ENST00000528593 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
CKAP5-209ENST00000528593 NUBP1P53384 320 aa11.46□□□□□ -0.57
CKAP5-209ENST00000528593 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
CKAP5-209ENST00000528593 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms