RNA–Protein interactions for RNA: ENST00000527054.1

AP003557.1-203, humanhuman

TSL 5

Gene AP003557.1, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-203ENST00000527054 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
AP003557.1-203ENST00000527054 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
AP003557.1-203ENST00000527054 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
AP003557.1-203ENST00000527054 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
AP003557.1-203ENST00000527054 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
AP003557.1-203ENST00000527054 FOXD1Q16676 465 aa12.38□□□□□ -0.43
AP003557.1-203ENST00000527054 ADRA2BP18089 450 aa12.02□□□□□ -0.49
AP003557.1-203ENST00000527054 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
AP003557.1-203ENST00000527054 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
AP003557.1-203ENST00000527054 MSH5O43196 834 aa11.41□□□□□ -0.58
AP003557.1-203ENST00000527054 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
AP003557.1-203ENST00000527054 SCAF1Q9H7N4 1312 aaKnown RBP11.06□□□□□ -0.64
AP003557.1-203ENST00000527054 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
AP003557.1-203ENST00000527054 KCNA4P22459 653 aa11.02□□□□□ -0.65
AP003557.1-203ENST00000527054 NCBP3Q53F19 620 aaKnown RBP10.96□□□□□ -0.65
AP003557.1-203ENST00000527054 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
AP003557.1-203ENST00000527054 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
AP003557.1-203ENST00000527054 NPM3O75607 178 aaKnown RBP10.73□□□□□ -0.69
AP003557.1-203ENST00000527054 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
AP003557.1-203ENST00000527054 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
AP003557.1-203ENST00000527054 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
AP003557.1-203ENST00000527054 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
AP003557.1-203ENST00000527054 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
AP003557.1-203ENST00000527054 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
AP003557.1-203ENST00000527054 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
AP003557.1-203ENST00000527054 POTEDQ86YR6 584 aa10.17□□□□□ -0.78
AP003557.1-203ENST00000527054 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
AP003557.1-203ENST00000527054 FOXD4L1Q9NU39 408 aa10.13□□□□□ -0.79
AP003557.1-203ENST00000527054 ZBTB22O15209 634 aa10.1□□□□□ -0.79
AP003557.1-203ENST00000527054 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
AP003557.1-203ENST00000527054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
AP003557.1-203ENST00000527054 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
AP003557.1-203ENST00000527054 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
AP003557.1-203ENST00000527054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
AP003557.1-203ENST00000527054 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
AP003557.1-203ENST00000527054 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
AP003557.1-203ENST00000527054 CCDC180Q9P1Z9 1646 aa9.75□□□□□ -0.85
AP003557.1-203ENST00000527054 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
AP003557.1-203ENST00000527054 RNF39Q9H2S5 420 aa9.75□□□□□ -0.85
AP003557.1-203ENST00000527054 APLP2Q06481 763 aa9.73□□□□□ -0.85
AP003557.1-203ENST00000527054 C1QBPQ07021 282 aaKnown RBP9.67□□□□□ -0.86
AP003557.1-203ENST00000527054 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
AP003557.1-203ENST00000527054 CAPN15O75808 1086 aa9.59□□□□□ -0.87
AP003557.1-203ENST00000527054 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
AP003557.1-203ENST00000527054 TRHP20396 242 aaPredicted RBP9.56□□□□□ -0.88
AP003557.1-203ENST00000527054 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
AP003557.1-203ENST00000527054 CACNB1Q02641 598 aaPredicted RBP9.49□□□□□ -0.89
AP003557.1-203ENST00000527054 POLA2Q14181 598 aa9.4□□□□□ -0.9
AP003557.1-203ENST00000527054 ABCB7O75027 752 aa9.38□□□□□ -0.91
AP003557.1-203ENST00000527054 DSG3P32926 999 aa9.33□□□□□ -0.92
AP003557.1-203ENST00000527054 FBLN2P98095 1184 aa9.3□□□□□ -0.92
AP003557.1-203ENST00000527054 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
AP003557.1-203ENST00000527054 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
AP003557.1-203ENST00000527054 FKBP8Q14318 412 aa9.24□□□□□ -0.93
AP003557.1-203ENST00000527054 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
AP003557.1-203ENST00000527054 MKRN4PQ13434 485 aaPredicted RBP9.2□□□□□ -0.94
AP003557.1-203ENST00000527054 MYO15BQ96JP2 1530 aa9.17□□□□□ -0.94
AP003557.1-203ENST00000527054 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
AP003557.1-203ENST00000527054 ABCC9O60706 1549 aa9.1□□□□□ -0.95
AP003557.1-203ENST00000527054 NACADO15069 1562 aa9.08□□□□□ -0.96
AP003557.1-203ENST00000527054 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
AP003557.1-203ENST00000527054 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
AP003557.1-203ENST00000527054 ZNF692Q9BU19 519 aaPredicted RBP9.02□□□□□ -0.97
AP003557.1-203ENST00000527054 SPDYE2BA6NHP3 402 aa9.01□□□□□ -0.97
AP003557.1-203ENST00000527054 SPDYE6P0CI01 402 aa9.01□□□□□ -0.97
AP003557.1-203ENST00000527054 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
AP003557.1-203ENST00000527054 RB1CC1Q8TDY2 1594 aa9.01□□□□□ -0.97
AP003557.1-203ENST00000527054 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
AP003557.1-203ENST00000527054 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
AP003557.1-203ENST00000527054 FBXO3Q9UK99 471 aa8.9□□□□□ -0.98
AP003557.1-203ENST00000527054 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
AP003557.1-203ENST00000527054 PROM2Q8N271 834 aa8.89□□□□□ -0.99
AP003557.1-203ENST00000527054 AKT1S1Q96B36 256 aa8.83□□□□□ -1
AP003557.1-203ENST00000527054 STAG3Q9UJ98 1225 aa8.79□□□□□ -1
AP003557.1-203ENST00000527054 SCRIBQ14160 1630 aa8.79□□□□□ -1
AP003557.1-203ENST00000527054 UNC13AQ9UPW8 1703 aa8.76□□□□□ -1.01
AP003557.1-203ENST00000527054 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
AP003557.1-203ENST00000527054 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
AP003557.1-203ENST00000527054 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
AP003557.1-203ENST00000527054 VASPP50552 380 aaPredicted RBP8.73□□□□□ -1.01
AP003557.1-203ENST00000527054 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
AP003557.1-203ENST00000527054 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
AP003557.1-203ENST00000527054 MIER1Q8N108 512 aa8.67□□□□□ -1.02
AP003557.1-203ENST00000527054 PLEKHG5O94827 1062 aa8.66□□□□□ -1.02
AP003557.1-203ENST00000527054 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
AP003557.1-203ENST00000527054 KLHL34Q8N239 644 aa8.64□□□□□ -1.03
AP003557.1-203ENST00000527054 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
AP003557.1-203ENST00000527054 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
AP003557.1-203ENST00000527054 AMER1Q5JTC6 1135 aaPredicted RBP8.62□□□□□ -1.03
AP003557.1-203ENST00000527054 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
AP003557.1-203ENST00000527054 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
AP003557.1-203ENST00000527054 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
AP003557.1-203ENST00000527054 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
AP003557.1-203ENST00000527054 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
AP003557.1-203ENST00000527054 CHRDL2Q6WN34 429 aa8.5□□□□□ -1.05
AP003557.1-203ENST00000527054 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
AP003557.1-203ENST00000527054 SMARCA4P51532 1647 aa8.49□□□□□ -1.05
AP003557.1-203ENST00000527054 RSF1Q96T23 1441 aaPredicted RBP8.48□□□□□ -1.05
AP003557.1-203ENST00000527054 CECR2Q9BXF3 1484 aa8.47□□□□□ -1.05
AP003557.1-203ENST00000527054 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms