RNA–Protein interactions for RNA: ENST00000526038.1

CCDC180-207, Transcript of coiled-coil domain containing 180, humanhuman

TSL 5

Gene CCDC180, Length 7,884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-207ENST00000526038 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
CCDC180-207ENST00000526038 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
CCDC180-207ENST00000526038 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
CCDC180-207ENST00000526038 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CCDC180-207ENST00000526038 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
CCDC180-207ENST00000526038 APLP2Q06481 763 aa15.04■□□□□ -0
CCDC180-207ENST00000526038 SUPT5HO00267 1087 aaKnown RBP14.95□□□□□ -0.02
CCDC180-207ENST00000526038 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
CCDC180-207ENST00000526038 MYT1Q01538 1121 aa14.83□□□□□ -0.04
CCDC180-207ENST00000526038 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
CCDC180-207ENST00000526038 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
CCDC180-207ENST00000526038 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
CCDC180-207ENST00000526038 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
CCDC180-207ENST00000526038 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
CCDC180-207ENST00000526038 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
CCDC180-207ENST00000526038 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
CCDC180-207ENST00000526038 NISCHQ9Y2I1 1504 aa14.49□□□□□ -0.09
CCDC180-207ENST00000526038 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
CCDC180-207ENST00000526038 NEFLP07196 543 aa14.36□□□□□ -0.11
CCDC180-207ENST00000526038 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
CCDC180-207ENST00000526038 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
CCDC180-207ENST00000526038 SLC24A1O60721 1099 aa14.2□□□□□ -0.14
CCDC180-207ENST00000526038 CNGB1Q14028 1251 aaPredicted RBP14.17□□□□□ -0.14
CCDC180-207ENST00000526038 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
CCDC180-207ENST00000526038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
CCDC180-207ENST00000526038 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
CCDC180-207ENST00000526038 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
CCDC180-207ENST00000526038 CLSPNQ9HAW4 1339 aa14.09□□□□□ -0.15
CCDC180-207ENST00000526038 UBTFP17480 764 aaKnown RBP14.06□□□□□ -0.16
CCDC180-207ENST00000526038 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
CCDC180-207ENST00000526038 BCL11AQ9H165 835 aa14.02□□□□□ -0.16
CCDC180-207ENST00000526038 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
CCDC180-207ENST00000526038 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
CCDC180-207ENST00000526038 ZEB1P37275 1124 aaPredicted RBP13.89□□□□□ -0.19
CCDC180-207ENST00000526038 BCANQ96GW7 911 aa13.89□□□□□ -0.19
CCDC180-207ENST00000526038 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
CCDC180-207ENST00000526038 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
CCDC180-207ENST00000526038 ITGAEP38570 1179 aa13.72□□□□□ -0.21
CCDC180-207ENST00000526038 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
CCDC180-207ENST00000526038 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
CCDC180-207ENST00000526038 A0A0G2JS52 829 aa13.67□□□□□ -0.22
CCDC180-207ENST00000526038 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
CCDC180-207ENST00000526038 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
CCDC180-207ENST00000526038 NEFMP07197 916 aa13.55□□□□□ -0.24
CCDC180-207ENST00000526038 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
CCDC180-207ENST00000526038 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.24
CCDC180-207ENST00000526038 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
CCDC180-207ENST00000526038 PPARGC1BQ86YN6 1023 aaKnown RBP13.46□□□□□ -0.25
CCDC180-207ENST00000526038 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
CCDC180-207ENST00000526038 FBLN2P98095 1184 aa13.39□□□□□ -0.27
CCDC180-207ENST00000526038 FAM50AQ14320 339 aaKnown RBP13.36□□□□□ -0.27
CCDC180-207ENST00000526038 ANP32BQ92688 251 aaKnown RBP13.33□□□□□ -0.28
CCDC180-207ENST00000526038 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
CCDC180-207ENST00000526038 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
CCDC180-207ENST00000526038 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
CCDC180-207ENST00000526038 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
CCDC180-207ENST00000526038 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
CCDC180-207ENST00000526038 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
CCDC180-207ENST00000526038 PRM3Q9NNZ6 103 aa13.25□□□□□ -0.29
CCDC180-207ENST00000526038 ZBTB7CA1YPR0 619 aa13.21□□□□□ -0.3
CCDC180-207ENST00000526038 NPHP1O15259 732 aa13.19□□□□□ -0.3
CCDC180-207ENST00000526038 ARXQ96QS3 562 aa13.18□□□□□ -0.3
CCDC180-207ENST00000526038 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
CCDC180-207ENST00000526038 CLSTN1O94985 981 aa13.16□□□□□ -0.3
CCDC180-207ENST00000526038 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC180-207ENST00000526038 HAP1P54257 671 aaPredicted RBP13.16□□□□□ -0.3
CCDC180-207ENST00000526038 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.31
CCDC180-207ENST00000526038 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
CCDC180-207ENST00000526038 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
CCDC180-207ENST00000526038 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
CCDC180-207ENST00000526038 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
CCDC180-207ENST00000526038 ANP32CO43423 234 aa13.04□□□□□ -0.32
CCDC180-207ENST00000526038 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC180-207ENST00000526038 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.32
CCDC180-207ENST00000526038 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
CCDC180-207ENST00000526038 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
CCDC180-207ENST00000526038 ABCC9O60706 1549 aa12.99□□□□□ -0.33
CCDC180-207ENST00000526038 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
CCDC180-207ENST00000526038 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
CCDC180-207ENST00000526038 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
CCDC180-207ENST00000526038 ANP32AP39687 249 aaKnown RBP12.92□□□□□ -0.34
CCDC180-207ENST00000526038 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
CCDC180-207ENST00000526038 TRIM44Q96DX7 344 aaPredicted RBP12.92□□□□□ -0.34
CCDC180-207ENST00000526038 ISY1Q9ULR0 285 aaKnown RBP12.9□□□□□ -0.34
CCDC180-207ENST00000526038 TPRNQ4KMQ1 711 aa12.9□□□□□ -0.34
CCDC180-207ENST00000526038 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
CCDC180-207ENST00000526038 HRCP23327 699 aa12.85□□□□□ -0.35
CCDC180-207ENST00000526038 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
CCDC180-207ENST00000526038 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
CCDC180-207ENST00000526038 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
CCDC180-207ENST00000526038 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
CCDC180-207ENST00000526038 NCLP19338 710 aaKnown RBP12.8□□□□□ -0.36
CCDC180-207ENST00000526038 FKBP8Q14318 412 aa12.8□□□□□ -0.36
CCDC180-207ENST00000526038 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
CCDC180-207ENST00000526038 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
CCDC180-207ENST00000526038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC180-207ENST00000526038 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
CCDC180-207ENST00000526038 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
CCDC180-207ENST00000526038 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
CCDC180-207ENST00000526038 PDE4CQ08493 712 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms