RNA–Protein interactions for RNA: ENST00000524905.1

RAET1E-204, retinoic acid early transcript 1E, humanhuman

TSL 3

Gene RAET1E, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-204ENST00000524905 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
RAET1E-204ENST00000524905 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
RAET1E-204ENST00000524905 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
RAET1E-204ENST00000524905 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
RAET1E-204ENST00000524905 FOXD1Q16676 465 aa19.78■□□□□ 0.76
RAET1E-204ENST00000524905 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
RAET1E-204ENST00000524905 MSH5O43196 834 aa18.59■□□□□ 0.57
RAET1E-204ENST00000524905 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
RAET1E-204ENST00000524905 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
RAET1E-204ENST00000524905 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
RAET1E-204ENST00000524905 ADRA2BP18089 450 aa18.14■□□□□ 0.49
RAET1E-204ENST00000524905 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
RAET1E-204ENST00000524905 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
RAET1E-204ENST00000524905 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
RAET1E-204ENST00000524905 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
RAET1E-204ENST00000524905 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
RAET1E-204ENST00000524905 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
RAET1E-204ENST00000524905 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
RAET1E-204ENST00000524905 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
RAET1E-204ENST00000524905 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
RAET1E-204ENST00000524905 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
RAET1E-204ENST00000524905 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
RAET1E-204ENST00000524905 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
RAET1E-204ENST00000524905 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
RAET1E-204ENST00000524905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
RAET1E-204ENST00000524905 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
RAET1E-204ENST00000524905 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
RAET1E-204ENST00000524905 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
RAET1E-204ENST00000524905 DSG3P32926 999 aa14.74□□□□□ -0.05
RAET1E-204ENST00000524905 CAPN15O75808 1086 aa14.71□□□□□ -0.05
RAET1E-204ENST00000524905 POTEHQ6S545 545 aa14.67□□□□□ -0.06
RAET1E-204ENST00000524905 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
RAET1E-204ENST00000524905 KCNA4P22459 653 aa14.46□□□□□ -0.09
RAET1E-204ENST00000524905 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
RAET1E-204ENST00000524905 ABCB7O75027 752 aa14.37□□□□□ -0.11
RAET1E-204ENST00000524905 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
RAET1E-204ENST00000524905 APLP2Q06481 763 aa14.3□□□□□ -0.12
RAET1E-204ENST00000524905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
RAET1E-204ENST00000524905 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
RAET1E-204ENST00000524905 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
RAET1E-204ENST00000524905 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
RAET1E-204ENST00000524905 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
RAET1E-204ENST00000524905 POLA2Q14181 598 aa13.93□□□□□ -0.18
RAET1E-204ENST00000524905 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
RAET1E-204ENST00000524905 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
RAET1E-204ENST00000524905 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
RAET1E-204ENST00000524905 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
RAET1E-204ENST00000524905 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
RAET1E-204ENST00000524905 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
RAET1E-204ENST00000524905 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
RAET1E-204ENST00000524905 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
RAET1E-204ENST00000524905 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
RAET1E-204ENST00000524905 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
RAET1E-204ENST00000524905 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
RAET1E-204ENST00000524905 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
RAET1E-204ENST00000524905 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAET1E-204ENST00000524905 HAX1O00165 279 aa13.34□□□□□ -0.27
RAET1E-204ENST00000524905 ZBTB22O15209 634 aa13.32□□□□□ -0.28
RAET1E-204ENST00000524905 EVX2Q03828 476 aa13.21□□□□□ -0.29
RAET1E-204ENST00000524905 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
RAET1E-204ENST00000524905 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
RAET1E-204ENST00000524905 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
RAET1E-204ENST00000524905 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
RAET1E-204ENST00000524905 FBLN2P98095 1184 aa13.09□□□□□ -0.31
RAET1E-204ENST00000524905 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
RAET1E-204ENST00000524905 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
RAET1E-204ENST00000524905 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
RAET1E-204ENST00000524905 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
RAET1E-204ENST00000524905 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
RAET1E-204ENST00000524905 C19orf67A6NJJ6 358 aa12.94□□□□□ -0.34
RAET1E-204ENST00000524905 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
RAET1E-204ENST00000524905 GABBR2O75899 941 aa12.84□□□□□ -0.35
RAET1E-204ENST00000524905 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
RAET1E-204ENST00000524905 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAET1E-204ENST00000524905 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
RAET1E-204ENST00000524905 LHX8Q68G74 356 aa12.72□□□□□ -0.37
RAET1E-204ENST00000524905 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
RAET1E-204ENST00000524905 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
RAET1E-204ENST00000524905 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
RAET1E-204ENST00000524905 CCDC180Q9P1Z9 1646 aa12.46□□□□□ -0.41
RAET1E-204ENST00000524905 CLCN6P51797 869 aa12.44□□□□□ -0.42
RAET1E-204ENST00000524905 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
RAET1E-204ENST00000524905 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
RAET1E-204ENST00000524905 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
RAET1E-204ENST00000524905 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
RAET1E-204ENST00000524905 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
RAET1E-204ENST00000524905 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
RAET1E-204ENST00000524905 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
RAET1E-204ENST00000524905 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
RAET1E-204ENST00000524905 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
RAET1E-204ENST00000524905 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
RAET1E-204ENST00000524905 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
RAET1E-204ENST00000524905 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
RAET1E-204ENST00000524905 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
RAET1E-204ENST00000524905 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
RAET1E-204ENST00000524905 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
RAET1E-204ENST00000524905 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
RAET1E-204ENST00000524905 POTEMA6NI47 508 aa12□□□□□ -0.49
RAET1E-204ENST00000524905 MS4A3Q96HJ5 214 aa12□□□□□ -0.49
RAET1E-204ENST00000524905 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms