RNA–Protein interactions for RNA: ENST00000521745.1

CDH12-207, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-207ENST00000521745 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
CDH12-207ENST00000521745 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CDH12-207ENST00000521745 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
CDH12-207ENST00000521745 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
CDH12-207ENST00000521745 FOXD1Q16676 465 aa17.53■□□□□ 0.4
CDH12-207ENST00000521745 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
CDH12-207ENST00000521745 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
CDH12-207ENST00000521745 ADRA2BP18089 450 aa16.52■□□□□ 0.24
CDH12-207ENST00000521745 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
CDH12-207ENST00000521745 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
CDH12-207ENST00000521745 MSH5O43196 834 aa16.4■□□□□ 0.22
CDH12-207ENST00000521745 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
CDH12-207ENST00000521745 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
CDH12-207ENST00000521745 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
CDH12-207ENST00000521745 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
CDH12-207ENST00000521745 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
CDH12-207ENST00000521745 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
CDH12-207ENST00000521745 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
CDH12-207ENST00000521745 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
CDH12-207ENST00000521745 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
CDH12-207ENST00000521745 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
CDH12-207ENST00000521745 KCNA4P22459 653 aa14.12□□□□□ -0.15
CDH12-207ENST00000521745 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
CDH12-207ENST00000521745 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
CDH12-207ENST00000521745 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
CDH12-207ENST00000521745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH12-207ENST00000521745 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
CDH12-207ENST00000521745 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
CDH12-207ENST00000521745 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
CDH12-207ENST00000521745 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
CDH12-207ENST00000521745 CAPN15O75808 1086 aa13.35□□□□□ -0.27
CDH12-207ENST00000521745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
CDH12-207ENST00000521745 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
CDH12-207ENST00000521745 APLP2Q06481 763 aa13.31□□□□□ -0.28
CDH12-207ENST00000521745 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
CDH12-207ENST00000521745 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
CDH12-207ENST00000521745 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
CDH12-207ENST00000521745 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
CDH12-207ENST00000521745 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
CDH12-207ENST00000521745 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
CDH12-207ENST00000521745 DSG3P32926 999 aa13.14□□□□□ -0.31
CDH12-207ENST00000521745 ABCB7O75027 752 aa13.03□□□□□ -0.32
CDH12-207ENST00000521745 ZBTB22O15209 634 aa12.95□□□□□ -0.34
CDH12-207ENST00000521745 POTEHQ6S545 545 aa12.9□□□□□ -0.34
CDH12-207ENST00000521745 POLA2Q14181 598 aa12.83□□□□□ -0.36
CDH12-207ENST00000521745 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
CDH12-207ENST00000521745 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
CDH12-207ENST00000521745 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
CDH12-207ENST00000521745 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
CDH12-207ENST00000521745 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
CDH12-207ENST00000521745 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
CDH12-207ENST00000521745 FBLN2P98095 1184 aa12.42□□□□□ -0.42
CDH12-207ENST00000521745 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
CDH12-207ENST00000521745 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
CDH12-207ENST00000521745 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
CDH12-207ENST00000521745 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
CDH12-207ENST00000521745 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
CDH12-207ENST00000521745 MKRN4PQ13434 485 aaPredicted RBP12.22□□□□□ -0.45
CDH12-207ENST00000521745 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
CDH12-207ENST00000521745 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
CDH12-207ENST00000521745 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
CDH12-207ENST00000521745 NISCHQ9Y2I1 1504 aa12.11□□□□□ -0.47
CDH12-207ENST00000521745 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
CDH12-207ENST00000521745 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
CDH12-207ENST00000521745 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
CDH12-207ENST00000521745 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
CDH12-207ENST00000521745 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
CDH12-207ENST00000521745 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDH12-207ENST00000521745 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDH12-207ENST00000521745 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
CDH12-207ENST00000521745 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
CDH12-207ENST00000521745 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
CDH12-207ENST00000521745 HAX1O00165 279 aa11.75□□□□□ -0.53
CDH12-207ENST00000521745 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
CDH12-207ENST00000521745 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
CDH12-207ENST00000521745 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
CDH12-207ENST00000521745 FARP1Q9Y4F1 1045 aaPredicted RBP11.52□□□□□ -0.57
CDH12-207ENST00000521745 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
CDH12-207ENST00000521745 EVX2Q03828 476 aa11.5□□□□□ -0.57
CDH12-207ENST00000521745 PROM2Q8N271 834 aa11.47□□□□□ -0.57
CDH12-207ENST00000521745 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
CDH12-207ENST00000521745 FKBP8Q14318 412 aa11.44□□□□□ -0.58
CDH12-207ENST00000521745 CD44P16070 742 aaKnown RBP11.43□□□□□ -0.58
CDH12-207ENST00000521745 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDH12-207ENST00000521745 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CDH12-207ENST00000521745 GABBR2O75899 941 aa11.31□□□□□ -0.6
CDH12-207ENST00000521745 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
CDH12-207ENST00000521745 MIER1Q8N108 512 aa11.3□□□□□ -0.6
CDH12-207ENST00000521745 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
CDH12-207ENST00000521745 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
CDH12-207ENST00000521745 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
CDH12-207ENST00000521745 CLCN6P51797 869 aa11.24□□□□□ -0.61
CDH12-207ENST00000521745 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
CDH12-207ENST00000521745 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
CDH12-207ENST00000521745 ZBTB47Q9UFB7 747 aaPredicted RBP11.16□□□□□ -0.62
CDH12-207ENST00000521745 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
CDH12-207ENST00000521745 PHF12Q96QT6 1004 aa11.13□□□□□ -0.63
CDH12-207ENST00000521745 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
CDH12-207ENST00000521745 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
CDH12-207ENST00000521745 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms