RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 AEBP2Q6ZN18 517 aaPredicted RBP11.4□□□□□ -0.58
MSR1-209ENST00000518960 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
MSR1-209ENST00000518960 SENP3Q9H4L4 574 aaPredicted RBP9.78□□□□□ -0.84
MSR1-209ENST00000518960 PHF23Q9BUL5 403 aaPredicted RBP9.7□□□□□ -0.86
MSR1-209ENST00000518960 FOXD1Q16676 465 aa9.09□□□□□ -0.95
MSR1-209ENST00000518960 PLPPR3Q6T4P5 718 aa9.04□□□□□ -0.96
MSR1-209ENST00000518960 POTEDQ86YR6 584 aa8.71□□□□□ -1.02
MSR1-209ENST00000518960 ADRA2BP18089 450 aa8.61□□□□□ -1.03
MSR1-209ENST00000518960 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
MSR1-209ENST00000518960 PIAS4Q8N2W9 510 aaPredicted RBP8.52□□□□□ -1.05
MSR1-209ENST00000518960 MSH5O43196 834 aa8.44□□□□□ -1.06
MSR1-209ENST00000518960 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
MSR1-209ENST00000518960 PPP4R3CPQ6ZMV5 832 aa7.92□□□□□ -1.14
MSR1-209ENST00000518960 MAPK8IP2Q13387 824 aaPredicted RBP7.82□□□□□ -1.16
MSR1-209ENST00000518960 NCBP3Q53F19 620 aaKnown RBP7.79□□□□□ -1.16
MSR1-209ENST00000518960 CNKSR2Q8WXI2 1034 aa7.75□□□□□ -1.17
MSR1-209ENST00000518960 DMRT2Q9Y5R5 561 aa7.75□□□□□ -1.17
MSR1-209ENST00000518960 RNF216Q9NWF9 866 aaPredicted RBP7.61□□□□□ -1.19
MSR1-209ENST00000518960 KCNA4P22459 653 aa7.6□□□□□ -1.19
MSR1-209ENST00000518960 HOXD11P31277 338 aaPredicted RBP7.56□□□□□ -1.2
MSR1-209ENST00000518960 NPM3O75607 178 aaKnown RBP7.55□□□□□ -1.2
MSR1-209ENST00000518960 DCAF8L1A6NGE4 600 aa7.48□□□□□ -1.21
MSR1-209ENST00000518960 CACNB1Q02641 598 aaPredicted RBP7.47□□□□□ -1.21
MSR1-209ENST00000518960 DNAJC5BQ9UF47 199 aa7.37□□□□□ -1.23
MSR1-209ENST00000518960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.28□□□□□ -1.24
MSR1-209ENST00000518960 SLC4A1APQ9BWU0 796 aaKnown RBP7.28□□□□□ -1.24
MSR1-209ENST00000518960 RNF39Q9H2S5 420 aa7.25□□□□□ -1.25
MSR1-209ENST00000518960 C1QBPQ07021 282 aaKnown RBP7.14□□□□□ -1.27
MSR1-209ENST00000518960 SLC4A2P04920 1241 aa7.12□□□□□ -1.27
MSR1-209ENST00000518960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.09□□□□□ -1.27
MSR1-209ENST00000518960 HNRNPUL2Q1KMD3 747 aaKnown RBP7.09□□□□□ -1.27
MSR1-209ENST00000518960 FOXD4L1Q9NU39 408 aa7.06□□□□□ -1.28
MSR1-209ENST00000518960 APLP2Q06481 763 aa7.05□□□□□ -1.28
MSR1-209ENST00000518960 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
MSR1-209ENST00000518960 MYCNP04198 464 aaPredicted RBP7.02□□□□□ -1.29
MSR1-209ENST00000518960 SAMD1Q6SPF0 538 aaPredicted RBP7.01□□□□□ -1.29
MSR1-209ENST00000518960 EHMT2Q96KQ7 1210 aa6.94□□□□□ -1.3
MSR1-209ENST00000518960 CAPN15O75808 1086 aa6.93□□□□□ -1.3
MSR1-209ENST00000518960 ZBTB22O15209 634 aa6.92□□□□□ -1.3
MSR1-209ENST00000518960 CSRNP3Q8WYN3 585 aa6.89□□□□□ -1.31
MSR1-209ENST00000518960 ZNF219Q9P2Y4 722 aaPredicted RBP6.89□□□□□ -1.31
MSR1-209ENST00000518960 ATXN8OSP0DMR3 200 aa6.88□□□□□ -1.31
MSR1-209ENST00000518960 TRHP20396 242 aaPredicted RBP6.87□□□□□ -1.31
MSR1-209ENST00000518960 SPINK5Q9NQ38 1064 aaPredicted RBP6.87□□□□□ -1.31
MSR1-209ENST00000518960 DSG3P32926 999 aa6.79□□□□□ -1.32
MSR1-209ENST00000518960 POTEHQ6S545 545 aa6.76□□□□□ -1.33
MSR1-209ENST00000518960 POLA2Q14181 598 aa6.75□□□□□ -1.33
MSR1-209ENST00000518960 ATF5Q9Y2D1 282 aaPredicted RBP6.74□□□□□ -1.33
MSR1-209ENST00000518960 ABCB7O75027 752 aa6.73□□□□□ -1.33
MSR1-209ENST00000518960 ZBTB12Q9Y330 459 aaPredicted RBP6.68□□□□□ -1.34
MSR1-209ENST00000518960 FBLN2P98095 1184 aa6.62□□□□□ -1.35
MSR1-209ENST00000518960 RBM42Q9BTD8 480 aaKnown RBP6.55□□□□□ -1.36
MSR1-209ENST00000518960 SPDYE2BA6NHP3 402 aa6.46□□□□□ -1.38
MSR1-209ENST00000518960 SPDYE6P0CI01 402 aa6.46□□□□□ -1.38
MSR1-209ENST00000518960 SPDYE2Q495Y8 402 aa6.46□□□□□ -1.38
MSR1-209ENST00000518960 MKRN4PQ13434 485 aaPredicted RBP6.45□□□□□ -1.38
MSR1-209ENST00000518960 OSCARQ8IYS5 282 aa6.44□□□□□ -1.38
MSR1-209ENST00000518960 AKT1S1Q96B36 256 aa6.44□□□□□ -1.38
MSR1-209ENST00000518960 ZNF692Q9BU19 519 aaPredicted RBP6.44□□□□□ -1.38
MSR1-209ENST00000518960 NISCHQ9Y2I1 1504 aa6.38□□□□□ -1.39
MSR1-209ENST00000518960 CHRDL2Q6WN34 429 aa6.37□□□□□ -1.39
MSR1-209ENST00000518960 SPDYE4A6NLX3 237 aa6.36□□□□□ -1.39
MSR1-209ENST00000518960 SSUH2Q9Y2M2 353 aa6.34□□□□□ -1.39
MSR1-209ENST00000518960 REM2Q8IYK8 340 aaPredicted RBP6.33□□□□□ -1.4
MSR1-209ENST00000518960 PABPN1Q86U42 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
MSR1-209ENST00000518960 SPDYE1Q8NFV5 336 aaPredicted RBP6.31□□□□□ -1.4
MSR1-209ENST00000518960 STAG3Q9UJ98 1225 aa6.29□□□□□ -1.4
MSR1-209ENST00000518960 FKBP8Q14318 412 aa6.27□□□□□ -1.41
MSR1-209ENST00000518960 CLEC11AQ9Y240 323 aa6.27□□□□□ -1.41
MSR1-209ENST00000518960 SP7Q8TDD2 431 aaPredicted RBP6.23□□□□□ -1.41
MSR1-209ENST00000518960 PITPNM1O00562 1244 aa6.22□□□□□ -1.41
MSR1-209ENST00000518960 PRR29P0C7W0 189 aa6.22□□□□□ -1.41
MSR1-209ENST00000518960 PIP4P2Q8N4L2 257 aa6.21□□□□□ -1.42
MSR1-209ENST00000518960 PROM2Q8N271 834 aa6.17□□□□□ -1.42
MSR1-209ENST00000518960 FBXO3Q9UK99 471 aa6.17□□□□□ -1.42
MSR1-209ENST00000518960 HAX1O00165 279 aa6.16□□□□□ -1.42
MSR1-209ENST00000518960 FXR2P51116 673 aaKnown RBP eCLIP6.15□□□□□ -1.42
MSR1-209ENST00000518960 EVX2Q03828 476 aa6.15□□□□□ -1.42
MSR1-209ENST00000518960 PLEKHG5O94827 1062 aa6.14□□□□□ -1.43
MSR1-209ENST00000518960 PRKAR2AP13861 404 aaKnown RBP6.11□□□□□ -1.43
MSR1-209ENST00000518960 MIER1Q8N108 512 aa6.1□□□□□ -1.43
MSR1-209ENST00000518960 PLCD3Q8N3E9 789 aa6.08□□□□□ -1.44
MSR1-209ENST00000518960 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
MSR1-209ENST00000518960 CHADLQ6NUI6 762 aa6.05□□□□□ -1.44
MSR1-209ENST00000518960 ZBTB47Q9UFB7 747 aaPredicted RBP6.05□□□□□ -1.44
MSR1-209ENST00000518960 CREBZFQ9NS37 354 aa6.04□□□□□ -1.44
MSR1-209ENST00000518960 FARP1Q9Y4F1 1045 aaPredicted RBP6.04□□□□□ -1.44
MSR1-209ENST00000518960 VASPP50552 380 aaPredicted RBP5.99□□□□□ -1.45
MSR1-209ENST00000518960 KLHL34Q8N239 644 aa5.99□□□□□ -1.45
MSR1-209ENST00000518960 PAK3O75914 559 aaPredicted RBP5.98□□□□□ -1.45
MSR1-209ENST00000518960 C19orf67A6NJJ6 358 aa5.94□□□□□ -1.46
MSR1-209ENST00000518960 CD44P16070 742 aaKnown RBP5.93□□□□□ -1.46
MSR1-209ENST00000518960 MNX1P50219 401 aaPredicted RBP5.93□□□□□ -1.46
MSR1-209ENST00000518960 CLCN6P51797 869 aa5.92□□□□□ -1.46
MSR1-209ENST00000518960 GABBR2O75899 941 aa5.91□□□□□ -1.46
MSR1-209ENST00000518960 ZRANB1Q9UGI0 708 aa5.9□□□□□ -1.46
MSR1-209ENST00000518960 SPOCK2Q92563 424 aa5.89□□□□□ -1.47
MSR1-209ENST00000518960 DCAF8Q5TAQ9 597 aa5.88□□□□□ -1.47
MSR1-209ENST00000518960 TSPYL2Q9H2G4 693 aaPredicted RBP5.88□□□□□ -1.47
MSR1-209ENST00000518960 GSE1Q14687 1217 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms