RNA–Protein interactions for RNA: ENST00000515863.1

ATR-210, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-210ENST00000515863 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
ATR-210ENST00000515863 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
ATR-210ENST00000515863 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
ATR-210ENST00000515863 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
ATR-210ENST00000515863 FOXD1Q16676 465 aa21.91■■□□□ 1.1
ATR-210ENST00000515863 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
ATR-210ENST00000515863 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
ATR-210ENST00000515863 ADRA2BP18089 450 aa20.64■□□□□ 0.89
ATR-210ENST00000515863 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
ATR-210ENST00000515863 MSH5O43196 834 aa20.41■□□□□ 0.86
ATR-210ENST00000515863 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
ATR-210ENST00000515863 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
ATR-210ENST00000515863 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
ATR-210ENST00000515863 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
ATR-210ENST00000515863 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
ATR-210ENST00000515863 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
ATR-210ENST00000515863 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
ATR-210ENST00000515863 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
ATR-210ENST00000515863 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
ATR-210ENST00000515863 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
ATR-210ENST00000515863 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
ATR-210ENST00000515863 KCNA4P22459 653 aa17.66■□□□□ 0.42
ATR-210ENST00000515863 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
ATR-210ENST00000515863 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
ATR-210ENST00000515863 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
ATR-210ENST00000515863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
ATR-210ENST00000515863 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
ATR-210ENST00000515863 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
ATR-210ENST00000515863 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
ATR-210ENST00000515863 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
ATR-210ENST00000515863 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
ATR-210ENST00000515863 CAPN15O75808 1086 aa16.59■□□□□ 0.25
ATR-210ENST00000515863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
ATR-210ENST00000515863 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
ATR-210ENST00000515863 APLP2Q06481 763 aa16.48■□□□□ 0.23
ATR-210ENST00000515863 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
ATR-210ENST00000515863 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
ATR-210ENST00000515863 DSG3P32926 999 aa16.42■□□□□ 0.22
ATR-210ENST00000515863 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
ATR-210ENST00000515863 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
ATR-210ENST00000515863 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
ATR-210ENST00000515863 ZBTB22O15209 634 aa16.24■□□□□ 0.19
ATR-210ENST00000515863 ABCB7O75027 752 aa16.24■□□□□ 0.19
ATR-210ENST00000515863 ATF5Q9Y2D1 282 aaPredicted RBP16.05■□□□□ 0.16
ATR-210ENST00000515863 POLA2Q14181 598 aa15.99■□□□□ 0.15
ATR-210ENST00000515863 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
ATR-210ENST00000515863 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
ATR-210ENST00000515863 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
ATR-210ENST00000515863 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
ATR-210ENST00000515863 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
ATR-210ENST00000515863 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
ATR-210ENST00000515863 FBLN2P98095 1184 aa15.41■□□□□ 0.06
ATR-210ENST00000515863 POTEHQ6S545 545 aa15.35■□□□□ 0.05
ATR-210ENST00000515863 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
ATR-210ENST00000515863 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
ATR-210ENST00000515863 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
ATR-210ENST00000515863 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
ATR-210ENST00000515863 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
ATR-210ENST00000515863 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
ATR-210ENST00000515863 REM2Q8IYK8 340 aaPredicted RBP15.21■□□□□ 0.03
ATR-210ENST00000515863 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
ATR-210ENST00000515863 PITPNM1O00562 1244 aa15.05■□□□□ -0
ATR-210ENST00000515863 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
ATR-210ENST00000515863 PIP4P2Q8N4L2 257 aa14.92□□□□□ -0.02
ATR-210ENST00000515863 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
ATR-210ENST00000515863 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
ATR-210ENST00000515863 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
ATR-210ENST00000515863 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
ATR-210ENST00000515863 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
ATR-210ENST00000515863 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
ATR-210ENST00000515863 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
ATR-210ENST00000515863 HAX1O00165 279 aa14.59□□□□□ -0.07
ATR-210ENST00000515863 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
ATR-210ENST00000515863 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
ATR-210ENST00000515863 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
ATR-210ENST00000515863 EVX2Q03828 476 aa14.42□□□□□ -0.1
ATR-210ENST00000515863 PROM2Q8N271 834 aa14.38□□□□□ -0.11
ATR-210ENST00000515863 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
ATR-210ENST00000515863 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
ATR-210ENST00000515863 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
ATR-210ENST00000515863 FKBP8Q14318 412 aa14.26□□□□□ -0.13
ATR-210ENST00000515863 CD44P16070 742 aaKnown RBP14.22□□□□□ -0.13
ATR-210ENST00000515863 GABBR2O75899 941 aa14.11□□□□□ -0.15
ATR-210ENST00000515863 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
ATR-210ENST00000515863 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
ATR-210ENST00000515863 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
ATR-210ENST00000515863 MIER1Q8N108 512 aa14.03□□□□□ -0.16
ATR-210ENST00000515863 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
ATR-210ENST00000515863 PLEKHG5O94827 1062 aa14□□□□□ -0.17
ATR-210ENST00000515863 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
ATR-210ENST00000515863 NISCHQ9Y2I1 1504 aa13.99□□□□□ -0.17
ATR-210ENST00000515863 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
ATR-210ENST00000515863 CLCN6P51797 869 aa13.95□□□□□ -0.18
ATR-210ENST00000515863 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
ATR-210ENST00000515863 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
ATR-210ENST00000515863 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
ATR-210ENST00000515863 GALR2O43603 387 aaPredicted RBP13.83□□□□□ -0.2
ATR-210ENST00000515863 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
ATR-210ENST00000515863 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
ATR-210ENST00000515863 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms