RNA–Protein interactions for RNA: ENST00000514238.2

RUFY1-214, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 4

Gene RUFY1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-214ENST00000514238 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
RUFY1-214ENST00000514238 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
RUFY1-214ENST00000514238 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
RUFY1-214ENST00000514238 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
RUFY1-214ENST00000514238 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
RUFY1-214ENST00000514238 FOXD1Q16676 465 aa17.07■□□□□ 0.32
RUFY1-214ENST00000514238 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RUFY1-214ENST00000514238 ADRA2BP18089 450 aa16.49■□□□□ 0.23
RUFY1-214ENST00000514238 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
RUFY1-214ENST00000514238 MSH5O43196 834 aa15.76■□□□□ 0.11
RUFY1-214ENST00000514238 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
RUFY1-214ENST00000514238 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
RUFY1-214ENST00000514238 KCNA4P22459 653 aa15.02■□□□□ -0
RUFY1-214ENST00000514238 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
RUFY1-214ENST00000514238 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
RUFY1-214ENST00000514238 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
RUFY1-214ENST00000514238 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
RUFY1-214ENST00000514238 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
RUFY1-214ENST00000514238 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
RUFY1-214ENST00000514238 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
RUFY1-214ENST00000514238 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
RUFY1-214ENST00000514238 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
RUFY1-214ENST00000514238 POTEDQ86YR6 584 aa14.13□□□□□ -0.15
RUFY1-214ENST00000514238 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
RUFY1-214ENST00000514238 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
RUFY1-214ENST00000514238 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
RUFY1-214ENST00000514238 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
RUFY1-214ENST00000514238 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
RUFY1-214ENST00000514238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■□□□□ 8.4
RUFY1-214ENST00000514238 ZBTB22O15209 634 aa13.79□□□□□ -0.2
RUFY1-214ENST00000514238 NISCHQ9Y2I1 1504 aa13.7□□□□□ -0.22
RUFY1-214ENST00000514238 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
RUFY1-214ENST00000514238 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
RUFY1-214ENST00000514238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
RUFY1-214ENST00000514238 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
RUFY1-214ENST00000514238 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
RUFY1-214ENST00000514238 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
RUFY1-214ENST00000514238 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
RUFY1-214ENST00000514238 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
RUFY1-214ENST00000514238 APLP2Q06481 763 aa13.35□□□□□ -0.27
RUFY1-214ENST00000514238 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
RUFY1-214ENST00000514238 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
RUFY1-214ENST00000514238 CAPN15O75808 1086 aa13.1□□□□□ -0.31
RUFY1-214ENST00000514238 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
RUFY1-214ENST00000514238 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
RUFY1-214ENST00000514238 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
RUFY1-214ENST00000514238 POLA2Q14181 598 aa12.89□□□□□ -0.35
RUFY1-214ENST00000514238 DSG3P32926 999 aa12.86□□□□□ -0.35
RUFY1-214ENST00000514238 ABCB7O75027 752 aa12.81□□□□□ -0.36
RUFY1-214ENST00000514238 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
RUFY1-214ENST00000514238 FBLN2P98095 1184 aa12.7□□□□□ -0.38
RUFY1-214ENST00000514238 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
RUFY1-214ENST00000514238 FKBP8Q14318 412 aa12.5□□□□□ -0.41
RUFY1-214ENST00000514238 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
RUFY1-214ENST00000514238 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
RUFY1-214ENST00000514238 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
RUFY1-214ENST00000514238 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
RUFY1-214ENST00000514238 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
RUFY1-214ENST00000514238 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
RUFY1-214ENST00000514238 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
RUFY1-214ENST00000514238 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
RUFY1-214ENST00000514238 PROM2Q8N271 834 aa12.24□□□□□ -0.45
RUFY1-214ENST00000514238 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
RUFY1-214ENST00000514238 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
RUFY1-214ENST00000514238 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
RUFY1-214ENST00000514238 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
RUFY1-214ENST00000514238 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
RUFY1-214ENST00000514238 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
RUFY1-214ENST00000514238 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
RUFY1-214ENST00000514238 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
RUFY1-214ENST00000514238 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
RUFY1-214ENST00000514238 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
RUFY1-214ENST00000514238 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
RUFY1-214ENST00000514238 MIER1Q8N108 512 aa11.81□□□□□ -0.52
RUFY1-214ENST00000514238 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
RUFY1-214ENST00000514238 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
RUFY1-214ENST00000514238 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
RUFY1-214ENST00000514238 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
RUFY1-214ENST00000514238 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
RUFY1-214ENST00000514238 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
RUFY1-214ENST00000514238 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
RUFY1-214ENST00000514238 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
RUFY1-214ENST00000514238 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
RUFY1-214ENST00000514238 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
RUFY1-214ENST00000514238 SPOCK2Q92563 424 aa11.6□□□□□ -0.55
RUFY1-214ENST00000514238 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
RUFY1-214ENST00000514238 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
RUFY1-214ENST00000514238 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
RUFY1-214ENST00000514238 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
RUFY1-214ENST00000514238 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
RUFY1-214ENST00000514238 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
RUFY1-214ENST00000514238 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
RUFY1-214ENST00000514238 NUBP1P53384 320 aa11.46□□□□□ -0.57
RUFY1-214ENST00000514238 SHROOM4Q9ULL8 1493 aa11.41□□□□□ -0.58
RUFY1-214ENST00000514238 GSE1Q14687 1217 aa11.4□□□□□ -0.58
RUFY1-214ENST00000514238 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
RUFY1-214ENST00000514238 FAM212AQ96EL1 285 aa11.38□□□□□ -0.59
RUFY1-214ENST00000514238 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
RUFY1-214ENST00000514238 PKD2Q13563 968 aa11.36□□□□□ -0.59
RUFY1-214ENST00000514238 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms