RNA–Protein interactions for RNA: ENST00000513026.5

LINC00461-213, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-213ENST00000513026 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
LINC00461-213ENST00000513026 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
LINC00461-213ENST00000513026 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
LINC00461-213ENST00000513026 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
LINC00461-213ENST00000513026 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINC00461-213ENST00000513026 SENP3Q9H4L4 574 aaPredicted RBP19.96■□□□□ 0.79
LINC00461-213ENST00000513026 ADRA2BP18089 450 aa18.73■□□□□ 0.59
LINC00461-213ENST00000513026 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
LINC00461-213ENST00000513026 KCNA4P22459 653 aa18.48■□□□□ 0.55
LINC00461-213ENST00000513026 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
LINC00461-213ENST00000513026 FOXD1Q16676 465 aa18.41■□□□□ 0.54
LINC00461-213ENST00000513026 PPP4R3CPQ6ZMV5 832 aa17.78■□□□□ 0.44
LINC00461-213ENST00000513026 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
LINC00461-213ENST00000513026 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
LINC00461-213ENST00000513026 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
LINC00461-213ENST00000513026 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
LINC00461-213ENST00000513026 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
LINC00461-213ENST00000513026 ZCCHC6Q5VYS8 1495 aaKnown RBP17.53■□□□□ 0.4
LINC00461-213ENST00000513026 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
LINC00461-213ENST00000513026 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
LINC00461-213ENST00000513026 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
LINC00461-213ENST00000513026 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
LINC00461-213ENST00000513026 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
LINC00461-213ENST00000513026 ZBTB22O15209 634 aa17.01■□□□□ 0.31
LINC00461-213ENST00000513026 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
LINC00461-213ENST00000513026 HRCP23327 699 aa16.95■□□□□ 0.3
LINC00461-213ENST00000513026 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LINC00461-213ENST00000513026 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
LINC00461-213ENST00000513026 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
LINC00461-213ENST00000513026 MSH5O43196 834 aa16.58■□□□□ 0.24
LINC00461-213ENST00000513026 ABCC9O60706 1549 aa16.58■□□□□ 0.24
LINC00461-213ENST00000513026 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
LINC00461-213ENST00000513026 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
LINC00461-213ENST00000513026 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
LINC00461-213ENST00000513026 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
LINC00461-213ENST00000513026 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
LINC00461-213ENST00000513026 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
LINC00461-213ENST00000513026 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
LINC00461-213ENST00000513026 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
LINC00461-213ENST00000513026 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
LINC00461-213ENST00000513026 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
LINC00461-213ENST00000513026 RTN4Q9NQC3 1192 aaKnown RBP16.28■□□□□ 0.2
LINC00461-213ENST00000513026 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
LINC00461-213ENST00000513026 NACADO15069 1562 aa16.21■□□□□ 0.19
LINC00461-213ENST00000513026 LOC105371045A0A1W2PR82 267 aa16.16■□□□□ 0.18
LINC00461-213ENST00000513026 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
LINC00461-213ENST00000513026 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
LINC00461-213ENST00000513026 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
LINC00461-213ENST00000513026 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
LINC00461-213ENST00000513026 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
LINC00461-213ENST00000513026 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
LINC00461-213ENST00000513026 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
LINC00461-213ENST00000513026 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
LINC00461-213ENST00000513026 FKBP8Q14318 412 aa15.99■□□□□ 0.15
LINC00461-213ENST00000513026 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
LINC00461-213ENST00000513026 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
LINC00461-213ENST00000513026 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
LINC00461-213ENST00000513026 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
LINC00461-213ENST00000513026 EEA1Q15075 1411 aa15.84■□□□□ 0.13
LINC00461-213ENST00000513026 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
LINC00461-213ENST00000513026 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
LINC00461-213ENST00000513026 WIZO95785 1651 aa15.74■□□□□ 0.11
LINC00461-213ENST00000513026 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
LINC00461-213ENST00000513026 MYT1Q01538 1121 aa15.67■□□□□ 0.1
LINC00461-213ENST00000513026 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
LINC00461-213ENST00000513026 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
LINC00461-213ENST00000513026 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
LINC00461-213ENST00000513026 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
LINC00461-213ENST00000513026 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
LINC00461-213ENST00000513026 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
LINC00461-213ENST00000513026 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
LINC00461-213ENST00000513026 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
LINC00461-213ENST00000513026 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
LINC00461-213ENST00000513026 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
LINC00461-213ENST00000513026 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
LINC00461-213ENST00000513026 KIF21BO75037 1637 aa15.45■□□□□ 0.06
LINC00461-213ENST00000513026 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
LINC00461-213ENST00000513026 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
LINC00461-213ENST00000513026 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
LINC00461-213ENST00000513026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC00461-213ENST00000513026 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
LINC00461-213ENST00000513026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
LINC00461-213ENST00000513026 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
LINC00461-213ENST00000513026 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
LINC00461-213ENST00000513026 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
LINC00461-213ENST00000513026 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
LINC00461-213ENST00000513026 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
LINC00461-213ENST00000513026 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
LINC00461-213ENST00000513026 SOGA1O94964 1423 aa15.33■□□□□ 0.04
LINC00461-213ENST00000513026 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
LINC00461-213ENST00000513026 VPS8Q8N3P4 1428 aa15.28■□□□□ 0.04
LINC00461-213ENST00000513026 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
LINC00461-213ENST00000513026 CLIP1P30622 1438 aa15.23■□□□□ 0.03
LINC00461-213ENST00000513026 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
LINC00461-213ENST00000513026 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
LINC00461-213ENST00000513026 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
LINC00461-213ENST00000513026 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
LINC00461-213ENST00000513026 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
LINC00461-213ENST00000513026 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
LINC00461-213ENST00000513026 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms