RNA–Protein interactions for RNA: ENST00000512504.1

USP24-206, Transcript of ubiquitin specific peptidase 24, humanhuman

TSL 4

Gene USP24, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP24-206ENST00000512504 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
USP24-206ENST00000512504 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
USP24-206ENST00000512504 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
USP24-206ENST00000512504 SENP3Q9H4L4 574 aaPredicted RBP11.63□□□□□ -0.55
USP24-206ENST00000512504 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
USP24-206ENST00000512504 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
USP24-206ENST00000512504 FOXD1Q16676 465 aa10.74□□□□□ -0.69
USP24-206ENST00000512504 ADRA2BP18089 450 aa10.49□□□□□ -0.73
USP24-206ENST00000512504 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
USP24-206ENST00000512504 MSH5O43196 834 aa10.18□□□□□ -0.78
USP24-206ENST00000512504 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
USP24-206ENST00000512504 KCNA4P22459 653 aa10.14□□□□□ -0.79
USP24-206ENST00000512504 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
USP24-206ENST00000512504 NCBP3Q53F19 620 aaKnown RBP9.93□□□□□ -0.82
USP24-206ENST00000512504 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
USP24-206ENST00000512504 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
USP24-206ENST00000512504 SCAF1Q9H7N4 1312 aaKnown RBP9.77□□□□□ -0.85
USP24-206ENST00000512504 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
USP24-206ENST00000512504 NPM3O75607 178 aaKnown RBP9.69□□□□□ -0.86
USP24-206ENST00000512504 CSRNP3Q8WYN3 585 aa9.59□□□□□ -0.87
USP24-206ENST00000512504 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
USP24-206ENST00000512504 DNAJC5BQ9UF47 199 aa9.52□□□□□ -0.89
USP24-206ENST00000512504 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
USP24-206ENST00000512504 MAPK8IP2Q13387 824 aaPredicted RBP9.38□□□□□ -0.91
USP24-206ENST00000512504 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
USP24-206ENST00000512504 DMRT2Q9Y5R5 561 aa9.31□□□□□ -0.92
USP24-206ENST00000512504 ZBTB22O15209 634 aa9.3□□□□□ -0.92
USP24-206ENST00000512504 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
USP24-206ENST00000512504 CACNB1Q02641 598 aaPredicted RBP9.26□□□□□ -0.93
USP24-206ENST00000512504 SLC4A2P04920 1241 aa9.04□□□□□ -0.96
USP24-206ENST00000512504 MYCNP04198 464 aaPredicted RBP9.02□□□□□ -0.97
USP24-206ENST00000512504 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
USP24-206ENST00000512504 PELP1Q8IZL8 1130 aaKnown RBP9□□□□□ -0.97
USP24-206ENST00000512504 HRCP23327 699 aa8.89□□□□□ -0.99
USP24-206ENST00000512504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.84□□□□□ -0.99
USP24-206ENST00000512504 HNRNPUL2Q1KMD3 747 aaKnown RBP8.84□□□□□ -0.99
USP24-206ENST00000512504 DCAF8L1A6NGE4 600 aa8.81□□□□□ -1
USP24-206ENST00000512504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.8□□□□□ -19e-7■■■■□ 21.5
USP24-206ENST00000512504 SAMD1Q6SPF0 538 aaPredicted RBP8.79□□□□□ -1
USP24-206ENST00000512504 MYT1Q01538 1121 aa8.78□□□□□ -1
USP24-206ENST00000512504 POTEHQ6S545 545 aa8.7□□□□□ -1.02
USP24-206ENST00000512504 APLP2Q06481 763 aa8.69□□□□□ -1.02
USP24-206ENST00000512504 U3KPZ7 1027 aaPredicted RBP8.68□□□□□ -1.02
USP24-206ENST00000512504 FKBP8Q14318 412 aa8.66□□□□□ -1.02
USP24-206ENST00000512504 AMER1Q5JTC6 1135 aaPredicted RBP8.63□□□□□ -1.03
USP24-206ENST00000512504 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
USP24-206ENST00000512504 ATF5Q9Y2D1 282 aaPredicted RBP8.6□□□□□ -1.03
USP24-206ENST00000512504 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
USP24-206ENST00000512504 ZNF219Q9P2Y4 722 aaPredicted RBP8.51□□□□□ -1.05
USP24-206ENST00000512504 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
USP24-206ENST00000512504 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
USP24-206ENST00000512504 RTN4Q9NQC3 1192 aaKnown RBP8.48□□□□□ -1.05
USP24-206ENST00000512504 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
USP24-206ENST00000512504 C1QBPQ07021 282 aaKnown RBP8.45□□□□□ -1.06
USP24-206ENST00000512504 MYO15BQ96JP2 1530 aa8.44□□□□□ -1.06
USP24-206ENST00000512504 CCDC180Q9P1Z9 1646 aa8.44□□□□□ -1.06
USP24-206ENST00000512504 FBXO3Q9UK99 471 aa8.37□□□□□ -1.07
USP24-206ENST00000512504 FBLN2P98095 1184 aa8.36□□□□□ -1.07
USP24-206ENST00000512504 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
USP24-206ENST00000512504 SPDYE4A6NLX3 237 aa8.33□□□□□ -1.08
USP24-206ENST00000512504 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
USP24-206ENST00000512504 SLC24A1O60721 1099 aa8.33□□□□□ -1.08
USP24-206ENST00000512504 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
USP24-206ENST00000512504 TRHP20396 242 aaPredicted RBP8.3□□□□□ -1.08
USP24-206ENST00000512504 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
USP24-206ENST00000512504 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
USP24-206ENST00000512504 PROM2Q8N271 834 aa8.29□□□□□ -1.08
USP24-206ENST00000512504 CAPN15O75808 1086 aa8.28□□□□□ -1.08
USP24-206ENST00000512504 SPINK5Q9NQ38 1064 aaPredicted RBP8.28□□□□□ -1.08
USP24-206ENST00000512504 POLA2Q14181 598 aa8.27□□□□□ -1.09
USP24-206ENST00000512504 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
USP24-206ENST00000512504 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
USP24-206ENST00000512504 CENPBP07199 599 aaPredicted RBP8.17□□□□□ -1.1
USP24-206ENST00000512504 ZCCHC6Q5VYS8 1495 aaKnown RBP8.17□□□□□ -1.1
USP24-206ENST00000512504 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
USP24-206ENST00000512504 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
USP24-206ENST00000512504 ABCB7O75027 752 aa8.1□□□□□ -1.11
USP24-206ENST00000512504 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
USP24-206ENST00000512504 LOC105371045A0A1W2PR82 267 aa8.08□□□□□ -1.12
USP24-206ENST00000512504 DSG3P32926 999 aa8.08□□□□□ -1.12
USP24-206ENST00000512504 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
USP24-206ENST00000512504 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
USP24-206ENST00000512504 SPDYE2Q495Y8 402 aa8.07□□□□□ -1.12
USP24-206ENST00000512504 IFNLR1Q8IU57 520 aaPredicted RBP8.04□□□□□ -1.12
USP24-206ENST00000512504 STAG3Q9UJ98 1225 aa8.04□□□□□ -1.12
USP24-206ENST00000512504 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
USP24-206ENST00000512504 SSUH2Q9Y2M2 353 aa8.02□□□□□ -1.13
USP24-206ENST00000512504 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
USP24-206ENST00000512504 OSCARQ8IYS5 282 aa7.98□□□□□ -1.13
USP24-206ENST00000512504 CLSPNQ9HAW4 1339 aa7.96□□□□□ -1.14
USP24-206ENST00000512504 SPOCK2Q92563 424 aa7.94□□□□□ -1.14
USP24-206ENST00000512504 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP24-206ENST00000512504 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
USP24-206ENST00000512504 PKD2Q13563 968 aa7.91□□□□□ -1.14
USP24-206ENST00000512504 KLHL34Q8N239 644 aa7.91□□□□□ -1.14
USP24-206ENST00000512504 TRIM41Q8WV44 630 aa7.91□□□□□ -1.14
USP24-206ENST00000512504 PLEKHG5O94827 1062 aa7.9□□□□□ -1.14
USP24-206ENST00000512504 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
USP24-206ENST00000512504 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
USP24-206ENST00000512504 ZBTB47Q9UFB7 747 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms