RNA–Protein interactions for RNA: ENST00000512331.5

RUFY3-210, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-210ENST00000512331 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
RUFY3-210ENST00000512331 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
RUFY3-210ENST00000512331 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
RUFY3-210ENST00000512331 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
RUFY3-210ENST00000512331 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
RUFY3-210ENST00000512331 ADRA2BP18089 450 aa17.87■□□□□ 0.45
RUFY3-210ENST00000512331 FOXD1Q16676 465 aa17.8■□□□□ 0.44
RUFY3-210ENST00000512331 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
RUFY3-210ENST00000512331 KCNA4P22459 653 aa17.47■□□□□ 0.39
RUFY3-210ENST00000512331 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
RUFY3-210ENST00000512331 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
RUFY3-210ENST00000512331 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
RUFY3-210ENST00000512331 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
RUFY3-210ENST00000512331 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
RUFY3-210ENST00000512331 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
RUFY3-210ENST00000512331 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
RUFY3-210ENST00000512331 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
RUFY3-210ENST00000512331 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
RUFY3-210ENST00000512331 MSH5O43196 834 aa16.13■□□□□ 0.17
RUFY3-210ENST00000512331 ZBTB22O15209 634 aa16.07■□□□□ 0.16
RUFY3-210ENST00000512331 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
RUFY3-210ENST00000512331 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
RUFY3-210ENST00000512331 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
RUFY3-210ENST00000512331 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
RUFY3-210ENST00000512331 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
RUFY3-210ENST00000512331 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
RUFY3-210ENST00000512331 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
RUFY3-210ENST00000512331 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
RUFY3-210ENST00000512331 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
RUFY3-210ENST00000512331 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
RUFY3-210ENST00000512331 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
RUFY3-210ENST00000512331 FKBP8Q14318 412 aa15.02■□□□□ -0
RUFY3-210ENST00000512331 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
RUFY3-210ENST00000512331 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
RUFY3-210ENST00000512331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
RUFY3-210ENST00000512331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
RUFY3-210ENST00000512331 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
RUFY3-210ENST00000512331 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
RUFY3-210ENST00000512331 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
RUFY3-210ENST00000512331 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
RUFY3-210ENST00000512331 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
RUFY3-210ENST00000512331 APLP2Q06481 763 aa14.43□□□□□ -0.1
RUFY3-210ENST00000512331 NISCHQ9Y2I1 1504 aa14.38□□□□□ -0.11
RUFY3-210ENST00000512331 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
RUFY3-210ENST00000512331 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
RUFY3-210ENST00000512331 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
RUFY3-210ENST00000512331 FBLN2P98095 1184 aa14.13□□□□□ -0.15
RUFY3-210ENST00000512331 PROM2Q8N271 834 aa14.1□□□□□ -0.15
RUFY3-210ENST00000512331 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
RUFY3-210ENST00000512331 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
RUFY3-210ENST00000512331 POTEDQ86YR6 584 aa14□□□□□ -0.17
RUFY3-210ENST00000512331 POLA2Q14181 598 aa13.99□□□□□ -0.17
RUFY3-210ENST00000512331 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
RUFY3-210ENST00000512331 CAPN15O75808 1086 aa13.93□□□□□ -0.18
RUFY3-210ENST00000512331 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
RUFY3-210ENST00000512331 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
RUFY3-210ENST00000512331 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
RUFY3-210ENST00000512331 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
RUFY3-210ENST00000512331 DCAF8L2P0C7V8 631 aa13.84□□□□□ -0.19
RUFY3-210ENST00000512331 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
RUFY3-210ENST00000512331 ABCB7O75027 752 aa13.74□□□□□ -0.21
RUFY3-210ENST00000512331 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
RUFY3-210ENST00000512331 PKD2Q13563 968 aa13.73□□□□□ -0.21
RUFY3-210ENST00000512331 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
RUFY3-210ENST00000512331 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
RUFY3-210ENST00000512331 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
RUFY3-210ENST00000512331 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
RUFY3-210ENST00000512331 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
RUFY3-210ENST00000512331 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
RUFY3-210ENST00000512331 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
RUFY3-210ENST00000512331 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
RUFY3-210ENST00000512331 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
RUFY3-210ENST00000512331 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
RUFY3-210ENST00000512331 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
RUFY3-210ENST00000512331 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
RUFY3-210ENST00000512331 BCANQ96GW7 911 aa13.49□□□□□ -0.25
RUFY3-210ENST00000512331 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
RUFY3-210ENST00000512331 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
RUFY3-210ENST00000512331 DSG3P32926 999 aa13.47□□□□□ -0.25
RUFY3-210ENST00000512331 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
RUFY3-210ENST00000512331 MIER1Q8N108 512 aa13.42□□□□□ -0.26
RUFY3-210ENST00000512331 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
RUFY3-210ENST00000512331 PAXIP1Q6ZW49 1069 aaPredicted RBP13.39□□□□□ -0.27
RUFY3-210ENST00000512331 RGL2O15211 777 aa13.37□□□□□ -0.27
RUFY3-210ENST00000512331 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
RUFY3-210ENST00000512331 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
RUFY3-210ENST00000512331 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
RUFY3-210ENST00000512331 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
RUFY3-210ENST00000512331 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
RUFY3-210ENST00000512331 SPRYD3Q8NCJ5 442 aa13.27□□□□□ -0.29
RUFY3-210ENST00000512331 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
RUFY3-210ENST00000512331 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
RUFY3-210ENST00000512331 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
RUFY3-210ENST00000512331 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
RUFY3-210ENST00000512331 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
RUFY3-210ENST00000512331 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
RUFY3-210ENST00000512331 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
RUFY3-210ENST00000512331 GSE1Q14687 1217 aa13.08□□□□□ -0.32
RUFY3-210ENST00000512331 RNF25Q96BH1 459 aaPredicted RBP13□□□□□ -0.33
RUFY3-210ENST00000512331 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms