RNA–Protein interactions for RNA: ENST00000510519.1

CCSER1-210, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 514 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-210ENST00000510519 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
CCSER1-210ENST00000510519 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
CCSER1-210ENST00000510519 SENP3Q9H4L4 574 aaPredicted RBP18.82■□□□□ 0.6
CCSER1-210ENST00000510519 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
CCSER1-210ENST00000510519 FOXD1Q16676 465 aa17.61■□□□□ 0.41
CCSER1-210ENST00000510519 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
CCSER1-210ENST00000510519 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
CCSER1-210ENST00000510519 MSH5O43196 834 aa16.57■□□□□ 0.24
CCSER1-210ENST00000510519 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CCSER1-210ENST00000510519 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
CCSER1-210ENST00000510519 ADRA2BP18089 450 aa16.16■□□□□ 0.18
CCSER1-210ENST00000510519 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
CCSER1-210ENST00000510519 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
CCSER1-210ENST00000510519 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
CCSER1-210ENST00000510519 KCNA4P22459 653 aa14.79□□□□□ -0.04
CCSER1-210ENST00000510519 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
CCSER1-210ENST00000510519 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
CCSER1-210ENST00000510519 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
CCSER1-210ENST00000510519 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
CCSER1-210ENST00000510519 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
CCSER1-210ENST00000510519 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
CCSER1-210ENST00000510519 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
CCSER1-210ENST00000510519 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
CCSER1-210ENST00000510519 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
CCSER1-210ENST00000510519 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
CCSER1-210ENST00000510519 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
CCSER1-210ENST00000510519 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
CCSER1-210ENST00000510519 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
CCSER1-210ENST00000510519 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
CCSER1-210ENST00000510519 ZBTB22O15209 634 aa13.58□□□□□ -0.24
CCSER1-210ENST00000510519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCSER1-210ENST00000510519 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
CCSER1-210ENST00000510519 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
CCSER1-210ENST00000510519 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
CCSER1-210ENST00000510519 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-210ENST00000510519 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
CCSER1-210ENST00000510519 CAPN15O75808 1086 aa13.13□□□□□ -0.31
CCSER1-210ENST00000510519 DSG3P32926 999 aa13.13□□□□□ -0.31
CCSER1-210ENST00000510519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-210ENST00000510519 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
CCSER1-210ENST00000510519 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
CCSER1-210ENST00000510519 POTEHQ6S545 545 aa13.04□□□□□ -0.32
CCSER1-210ENST00000510519 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
CCSER1-210ENST00000510519 APLP2Q06481 763 aa12.93□□□□□ -0.34
CCSER1-210ENST00000510519 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
CCSER1-210ENST00000510519 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
CCSER1-210ENST00000510519 ABCB7O75027 752 aa12.8□□□□□ -0.36
CCSER1-210ENST00000510519 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
CCSER1-210ENST00000510519 POLA2Q14181 598 aa12.58□□□□□ -0.4
CCSER1-210ENST00000510519 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
CCSER1-210ENST00000510519 FBLN2P98095 1184 aa12.41□□□□□ -0.42
CCSER1-210ENST00000510519 FKBP8Q14318 412 aa12.38□□□□□ -0.43
CCSER1-210ENST00000510519 CHRDL2Q6WN34 429 aa12.37□□□□□ -0.43
CCSER1-210ENST00000510519 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
CCSER1-210ENST00000510519 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
CCSER1-210ENST00000510519 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
CCSER1-210ENST00000510519 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
CCSER1-210ENST00000510519 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
CCSER1-210ENST00000510519 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
CCSER1-210ENST00000510519 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
CCSER1-210ENST00000510519 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CCSER1-210ENST00000510519 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
CCSER1-210ENST00000510519 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
CCSER1-210ENST00000510519 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
CCSER1-210ENST00000510519 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
CCSER1-210ENST00000510519 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
CCSER1-210ENST00000510519 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCSER1-210ENST00000510519 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
CCSER1-210ENST00000510519 HAX1O00165 279 aa11.9□□□□□ -0.5
CCSER1-210ENST00000510519 PROM2Q8N271 834 aa11.9□□□□□ -0.5
CCSER1-210ENST00000510519 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCSER1-210ENST00000510519 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
CCSER1-210ENST00000510519 EVX2Q03828 476 aa11.74□□□□□ -0.53
CCSER1-210ENST00000510519 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
CCSER1-210ENST00000510519 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
CCSER1-210ENST00000510519 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
CCSER1-210ENST00000510519 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
CCSER1-210ENST00000510519 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
CCSER1-210ENST00000510519 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
CCSER1-210ENST00000510519 MIER1Q8N108 512 aa11.58□□□□□ -0.56
CCSER1-210ENST00000510519 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
CCSER1-210ENST00000510519 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
CCSER1-210ENST00000510519 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
CCSER1-210ENST00000510519 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
CCSER1-210ENST00000510519 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
CCSER1-210ENST00000510519 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
CCSER1-210ENST00000510519 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
CCSER1-210ENST00000510519 GABBR2O75899 941 aa11.45□□□□□ -0.58
CCSER1-210ENST00000510519 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
CCSER1-210ENST00000510519 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
CCSER1-210ENST00000510519 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
CCSER1-210ENST00000510519 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
CCSER1-210ENST00000510519 LHX8Q68G74 356 aa11.33□□□□□ -0.6
CCSER1-210ENST00000510519 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
CCSER1-210ENST00000510519 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
CCSER1-210ENST00000510519 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
CCSER1-210ENST00000510519 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
CCSER1-210ENST00000510519 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCSER1-210ENST00000510519 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
CCSER1-210ENST00000510519 PKD2Q13563 968 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms