RNA–Protein interactions for RNA: ENST00000509055.1

AP3S1-206, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-206ENST00000509055 AEBP2Q6ZN18 517 aaPredicted RBP14.56□□□□□ -0.08
AP3S1-206ENST00000509055 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
AP3S1-206ENST00000509055 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
AP3S1-206ENST00000509055 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
AP3S1-206ENST00000509055 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
AP3S1-206ENST00000509055 FOXD1Q16676 465 aa11.4□□□□□ -0.58
AP3S1-206ENST00000509055 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
AP3S1-206ENST00000509055 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
AP3S1-206ENST00000509055 MSH5O43196 834 aa10.98□□□□□ -0.65
AP3S1-206ENST00000509055 ADRA2BP18089 450 aa10.97□□□□□ -0.65
AP3S1-206ENST00000509055 PIAS4Q8N2W9 510 aaPredicted RBP10.65□□□□□ -0.7
AP3S1-206ENST00000509055 PPP4R3CPQ6ZMV5 832 aa10.06□□□□□ -0.8
AP3S1-206ENST00000509055 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
AP3S1-206ENST00000509055 KCNA4P22459 653 aa9.9□□□□□ -0.82
AP3S1-206ENST00000509055 CACNB1Q02641 598 aaPredicted RBP9.84□□□□□ -0.83
AP3S1-206ENST00000509055 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
AP3S1-206ENST00000509055 DMRT2Q9Y5R5 561 aa9.77□□□□□ -0.85
AP3S1-206ENST00000509055 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
AP3S1-206ENST00000509055 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
AP3S1-206ENST00000509055 NCBP3Q53F19 620 aaKnown RBP9.67□□□□□ -0.86
AP3S1-206ENST00000509055 HOXD11P31277 338 aaPredicted RBP9.59□□□□□ -0.87
AP3S1-206ENST00000509055 RNF216Q9NWF9 866 aaPredicted RBP9.57□□□□□ -0.88
AP3S1-206ENST00000509055 DNAJC5BQ9UF47 199 aa9.45□□□□□ -0.9
AP3S1-206ENST00000509055 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
AP3S1-206ENST00000509055 POTEHQ6S545 545 aa9.3□□□□□ -0.92
AP3S1-206ENST00000509055 RNF39Q9H2S5 420 aa9.26□□□□□ -0.93
AP3S1-206ENST00000509055 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
AP3S1-206ENST00000509055 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
AP3S1-206ENST00000509055 ZBTB22O15209 634 aa9.2□□□□□ -0.94
AP3S1-206ENST00000509055 C1QBPQ07021 282 aaKnown RBP9.11□□□□□ -0.95
AP3S1-206ENST00000509055 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
AP3S1-206ENST00000509055 EHMT2Q96KQ7 1210 aa9.08□□□□□ -0.96
AP3S1-206ENST00000509055 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
AP3S1-206ENST00000509055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.97
AP3S1-206ENST00000509055 U3KPZ7 1027 aaPredicted RBP9□□□□□ -0.97
AP3S1-206ENST00000509055 MYCNP04198 464 aaPredicted RBP8.87□□□□□ -0.99
AP3S1-206ENST00000509055 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
AP3S1-206ENST00000509055 SPINK5Q9NQ38 1064 aaPredicted RBP8.76□□□□□ -1.01
AP3S1-206ENST00000509055 SAMD1Q6SPF0 538 aaPredicted RBP8.71□□□□□ -1.02
AP3S1-206ENST00000509055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.69□□□□□ -1.02
AP3S1-206ENST00000509055 ATXN8OSP0DMR3 200 aa8.69□□□□□ -1.02
AP3S1-206ENST00000509055 HNRNPUL2Q1KMD3 747 aaKnown RBP8.69□□□□□ -1.02
AP3S1-206ENST00000509055 CAPN15O75808 1086 aa8.58□□□□□ -1.04
AP3S1-206ENST00000509055 TRHP20396 242 aaPredicted RBP8.57□□□□□ -1.04
AP3S1-206ENST00000509055 DSG3P32926 999 aa8.56□□□□□ -1.04
AP3S1-206ENST00000509055 ZNF219Q9P2Y4 722 aaPredicted RBP8.55□□□□□ -1.04
AP3S1-206ENST00000509055 APLP2Q06481 763 aa8.53□□□□□ -1.04
AP3S1-206ENST00000509055 ABCB7O75027 752 aa8.49□□□□□ -1.05
AP3S1-206ENST00000509055 POLA2Q14181 598 aa8.47□□□□□ -1.05
AP3S1-206ENST00000509055 MKRN4PQ13434 485 aaPredicted RBP8.41□□□□□ -1.06
AP3S1-206ENST00000509055 SP7Q8TDD2 431 aaPredicted RBP8.34□□□□□ -1.07
AP3S1-206ENST00000509055 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
AP3S1-206ENST00000509055 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
AP3S1-206ENST00000509055 FBLN2P98095 1184 aa8.18□□□□□ -1.1
AP3S1-206ENST00000509055 CHRDL2Q6WN34 429 aa8.17□□□□□ -1.1
AP3S1-206ENST00000509055 FKBP8Q14318 412 aa8.1□□□□□ -1.11
AP3S1-206ENST00000509055 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
AP3S1-206ENST00000509055 SPDYE4A6NLX3 237 aa8.08□□□□□ -1.12
AP3S1-206ENST00000509055 PROM2Q8N271 834 aa8.08□□□□□ -1.12
AP3S1-206ENST00000509055 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
AP3S1-206ENST00000509055 SPDYE2BA6NHP3 402 aa8.06□□□□□ -1.12
AP3S1-206ENST00000509055 SPDYE6P0CI01 402 aa8.06□□□□□ -1.12
AP3S1-206ENST00000509055 SPDYE2Q495Y8 402 aa8.06□□□□□ -1.12
AP3S1-206ENST00000509055 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
AP3S1-206ENST00000509055 AKT1S1Q96B36 256 aa7.96□□□□□ -1.14
AP3S1-206ENST00000509055 PABPN1Q86U42 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
AP3S1-206ENST00000509055 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
AP3S1-206ENST00000509055 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
AP3S1-206ENST00000509055 PITPNM1O00562 1244 aa7.87□□□□□ -1.15
AP3S1-206ENST00000509055 HAX1O00165 279 aa7.82□□□□□ -1.16
AP3S1-206ENST00000509055 LHX8Q68G74 356 aa7.79□□□□□ -1.16
AP3S1-206ENST00000509055 SPDYE1Q8NFV5 336 aaPredicted RBP7.79□□□□□ -1.16
AP3S1-206ENST00000509055 PIP4P2Q8N4L2 257 aa7.77□□□□□ -1.17
AP3S1-206ENST00000509055 CLEC11AQ9Y240 323 aa7.76□□□□□ -1.17
AP3S1-206ENST00000509055 FXR2P51116 673 aaKnown RBP eCLIP7.73□□□□□ -1.17
AP3S1-206ENST00000509055 CREBZFQ9NS37 354 aa7.72□□□□□ -1.17
AP3S1-206ENST00000509055 STAG3Q9UJ98 1225 aa7.72□□□□□ -1.17
AP3S1-206ENST00000509055 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-206ENST00000509055 VASPP50552 380 aaPredicted RBP7.71□□□□□ -1.18
AP3S1-206ENST00000509055 FBXO3Q9UK99 471 aa7.71□□□□□ -1.18
AP3S1-206ENST00000509055 PRR29P0C7W0 189 aa7.69□□□□□ -1.18
AP3S1-206ENST00000509055 IFNLR1Q8IU57 520 aaPredicted RBP7.69□□□□□ -1.18
AP3S1-206ENST00000509055 CHADLQ6NUI6 762 aa7.67□□□□□ -1.18
AP3S1-206ENST00000509055 EVX2Q03828 476 aa7.65□□□□□ -1.18
AP3S1-206ENST00000509055 PRKAR2AP13861 404 aaKnown RBP7.62□□□□□ -1.19
AP3S1-206ENST00000509055 MIER1Q8N108 512 aa7.61□□□□□ -1.19
AP3S1-206ENST00000509055 PLCD3Q8N3E9 789 aa7.57□□□□□ -1.2
AP3S1-206ENST00000509055 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
AP3S1-206ENST00000509055 NUBP1P53384 320 aa7.55□□□□□ -1.2
AP3S1-206ENST00000509055 RASEFQ8IZ41 740 aa7.51□□□□□ -1.21
AP3S1-206ENST00000509055 GABBR2O75899 941 aa7.48□□□□□ -1.21
AP3S1-206ENST00000509055 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
AP3S1-206ENST00000509055 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
AP3S1-206ENST00000509055 C19orf67A6NJJ6 358 aa7.46□□□□□ -1.22
AP3S1-206ENST00000509055 PKD2Q13563 968 aa7.45□□□□□ -1.22
AP3S1-206ENST00000509055 RTN4Q9NQC3 1192 aaKnown RBP7.45□□□□□ -1.22
AP3S1-206ENST00000509055 ZBTB47Q9UFB7 747 aaPredicted RBP7.44□□□□□ -1.22
AP3S1-206ENST00000509055 PLEKHG5O94827 1062 aa7.43□□□□□ -1.22
AP3S1-206ENST00000509055 NPM1P06748 294 aaKnown RBP eCLIP7.41□□□□□ -1.22
AP3S1-206ENST00000509055 CCDC61Q9Y6R9 512 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms