RNA–Protein interactions for RNA: ENST00000507645.5

DDX4-207, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-207ENST00000507645 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
DDX4-207ENST00000507645 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
DDX4-207ENST00000507645 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
DDX4-207ENST00000507645 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
DDX4-207ENST00000507645 FOXD1Q16676 465 aa12.83□□□□□ -0.36
DDX4-207ENST00000507645 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
DDX4-207ENST00000507645 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
DDX4-207ENST00000507645 ADRA2BP18089 450 aa12.02□□□□□ -0.49
DDX4-207ENST00000507645 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
DDX4-207ENST00000507645 MSH5O43196 834 aa11.99□□□□□ -0.49
DDX4-207ENST00000507645 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
DDX4-207ENST00000507645 SCAF1Q9H7N4 1312 aaKnown RBP11.02□□□□□ -0.65
DDX4-207ENST00000507645 MAPK8IP2Q13387 824 aaPredicted RBP11□□□□□ -0.65
DDX4-207ENST00000507645 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
DDX4-207ENST00000507645 PPP4R3CPQ6ZMV5 832 aa10.89□□□□□ -0.67
DDX4-207ENST00000507645 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
DDX4-207ENST00000507645 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
DDX4-207ENST00000507645 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
DDX4-207ENST00000507645 NCBP3Q53F19 620 aaKnown RBP10.51□□□□□ -0.73
DDX4-207ENST00000507645 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
DDX4-207ENST00000507645 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
DDX4-207ENST00000507645 DNAJC5BQ9UF47 199 aa10.28□□□□□ -0.76
DDX4-207ENST00000507645 KCNA4P22459 653 aa10.26□□□□□ -0.77
DDX4-207ENST00000507645 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
DDX4-207ENST00000507645 CACNB1Q02641 598 aaPredicted RBP10.17□□□□□ -0.78
DDX4-207ENST00000507645 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
DDX4-207ENST00000507645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX4-207ENST00000507645 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
DDX4-207ENST00000507645 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
DDX4-207ENST00000507645 SLC4A1APQ9BWU0 796 aaKnown RBP9.7□□□□□ -0.86
DDX4-207ENST00000507645 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
DDX4-207ENST00000507645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
DDX4-207ENST00000507645 CAPN15O75808 1086 aa9.66□□□□□ -0.86
DDX4-207ENST00000507645 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
DDX4-207ENST00000507645 APLP2Q06481 763 aa9.65□□□□□ -0.86
DDX4-207ENST00000507645 DSG3P32926 999 aa9.61□□□□□ -0.87
DDX4-207ENST00000507645 SAMD1Q6SPF0 538 aaPredicted RBP9.61□□□□□ -0.87
DDX4-207ENST00000507645 MYCNP04198 464 aaPredicted RBP9.6□□□□□ -0.87
DDX4-207ENST00000507645 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
DDX4-207ENST00000507645 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
DDX4-207ENST00000507645 TRHP20396 242 aaPredicted RBP9.52□□□□□ -0.89
DDX4-207ENST00000507645 ZBTB22O15209 634 aa9.45□□□□□ -0.9
DDX4-207ENST00000507645 ABCB7O75027 752 aa9.44□□□□□ -0.9
DDX4-207ENST00000507645 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
DDX4-207ENST00000507645 POLA2Q14181 598 aa9.31□□□□□ -0.92
DDX4-207ENST00000507645 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
DDX4-207ENST00000507645 RBM42Q9BTD8 480 aaKnown RBP9.19□□□□□ -0.94
DDX4-207ENST00000507645 ZBTB12Q9Y330 459 aaPredicted RBP9.18□□□□□ -0.94
DDX4-207ENST00000507645 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
DDX4-207ENST00000507645 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
DDX4-207ENST00000507645 POTEHQ6S545 545 aa9.02□□□□□ -0.97
DDX4-207ENST00000507645 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
DDX4-207ENST00000507645 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
DDX4-207ENST00000507645 FBLN2P98095 1184 aa8.97□□□□□ -0.97
DDX4-207ENST00000507645 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
DDX4-207ENST00000507645 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
DDX4-207ENST00000507645 SPDYE2BA6NHP3 402 aa8.9□□□□□ -0.98
DDX4-207ENST00000507645 SPDYE6P0CI01 402 aa8.9□□□□□ -0.98
DDX4-207ENST00000507645 SPDYE2Q495Y8 402 aa8.9□□□□□ -0.98
DDX4-207ENST00000507645 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
DDX4-207ENST00000507645 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
DDX4-207ENST00000507645 PITPNM1O00562 1244 aa8.81□□□□□ -1
DDX4-207ENST00000507645 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
DDX4-207ENST00000507645 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
DDX4-207ENST00000507645 FXR2P51116 673 aaKnown RBP eCLIP8.72□□□□□ -1.01
DDX4-207ENST00000507645 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
DDX4-207ENST00000507645 PABPN1Q86U42 306 aaKnown RBP eCLIP8.65□□□□□ -1.02
DDX4-207ENST00000507645 NISCHQ9Y2I1 1504 aa8.64□□□□□ -1.03
DDX4-207ENST00000507645 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
DDX4-207ENST00000507645 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
DDX4-207ENST00000507645 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
DDX4-207ENST00000507645 PRR29P0C7W0 189 aa8.52□□□□□ -1.05
DDX4-207ENST00000507645 SP7Q8TDD2 431 aaPredicted RBP8.52□□□□□ -1.05
DDX4-207ENST00000507645 HAX1O00165 279 aa8.5□□□□□ -1.05
DDX4-207ENST00000507645 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
DDX4-207ENST00000507645 STAG3Q9UJ98 1225 aa8.46□□□□□ -1.06
DDX4-207ENST00000507645 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
DDX4-207ENST00000507645 PROM2Q8N271 834 aa8.43□□□□□ -1.06
DDX4-207ENST00000507645 EVX2Q03828 476 aa8.42□□□□□ -1.06
DDX4-207ENST00000507645 FARP1Q9Y4F1 1045 aaPredicted RBP8.38□□□□□ -1.07
DDX4-207ENST00000507645 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
DDX4-207ENST00000507645 CD44P16070 742 aaKnown RBP8.3□□□□□ -1.08
DDX4-207ENST00000507645 MNX1P50219 401 aaPredicted RBP8.26□□□□□ -1.09
DDX4-207ENST00000507645 GABBR2O75899 941 aa8.25□□□□□ -1.09
DDX4-207ENST00000507645 FKBP8Q14318 412 aa8.23□□□□□ -1.09
DDX4-207ENST00000507645 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
DDX4-207ENST00000507645 NPM1P06748 294 aaKnown RBP eCLIP8.2□□□□□ -1.1
DDX4-207ENST00000507645 CLCN6P51797 869 aa8.2□□□□□ -1.1
DDX4-207ENST00000507645 ZRANB1Q9UGI0 708 aa8.18□□□□□ -1.1
DDX4-207ENST00000507645 PAK3O75914 559 aaPredicted RBP8.15□□□□□ -1.1
DDX4-207ENST00000507645 PLEKHG5O94827 1062 aa8.11□□□□□ -1.11
DDX4-207ENST00000507645 POTEIP0CG38 1075 aa8.1□□□□□ -1.11
DDX4-207ENST00000507645 MIER1Q8N108 512 aa8.1□□□□□ -1.11
DDX4-207ENST00000507645 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
DDX4-207ENST00000507645 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
DDX4-207ENST00000507645 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
DDX4-207ENST00000507645 ZBTB47Q9UFB7 747 aaPredicted RBP8.05□□□□□ -1.12
DDX4-207ENST00000507645 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
DDX4-207ENST00000507645 CCDC61Q9Y6R9 512 aa8.05□□□□□ -1.12
DDX4-207ENST00000507645 RASEFQ8IZ41 740 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms