RNA–Protein interactions for RNA: ENST00000506664.5

LINC00461-206, long intergenic non-protein coding RNA 461, humanhuman

TSL 2

Gene LINC00461, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-206ENST00000506664 AEBP2Q6ZN18 517 aaPredicted RBP31.72■■■□□ 2.67
LINC00461-206ENST00000506664 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
LINC00461-206ENST00000506664 SENP3Q9H4L4 574 aaPredicted RBP27.1■■□□□ 1.93
LINC00461-206ENST00000506664 PHF23Q9BUL5 403 aaPredicted RBP26.71■■□□□ 1.87
LINC00461-206ENST00000506664 FOXD1Q16676 465 aa25.18■■□□□ 1.62
LINC00461-206ENST00000506664 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
LINC00461-206ENST00000506664 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
LINC00461-206ENST00000506664 MSH5O43196 834 aa23.57■■□□□ 1.36
LINC00461-206ENST00000506664 PIAS4Q8N2W9 510 aaPredicted RBP23.56■■□□□ 1.36
LINC00461-206ENST00000506664 ADRA2BP18089 450 aa23.55■■□□□ 1.36
LINC00461-206ENST00000506664 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
LINC00461-206ENST00000506664 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
LINC00461-206ENST00000506664 MAPK8IP2Q13387 824 aaPredicted RBP21.56■■□□□ 1.04
LINC00461-206ENST00000506664 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
LINC00461-206ENST00000506664 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
LINC00461-206ENST00000506664 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
LINC00461-206ENST00000506664 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
LINC00461-206ENST00000506664 KCNA4P22459 653 aa20.75■□□□□ 0.91
LINC00461-206ENST00000506664 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
LINC00461-206ENST00000506664 NCBP3Q53F19 620 aaKnown RBP20.56■□□□□ 0.88
LINC00461-206ENST00000506664 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
LINC00461-206ENST00000506664 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
LINC00461-206ENST00000506664 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
LINC00461-206ENST00000506664 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
LINC00461-206ENST00000506664 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
LINC00461-206ENST00000506664 C1QBPQ07021 282 aaKnown RBP19.85■□□□□ 0.77
LINC00461-206ENST00000506664 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
LINC00461-206ENST00000506664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.74■□□□□ 0.75
LINC00461-206ENST00000506664 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
LINC00461-206ENST00000506664 U3KPZ7 1027 aaPredicted RBP19.38■□□□□ 0.69
LINC00461-206ENST00000506664 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
LINC00461-206ENST00000506664 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
LINC00461-206ENST00000506664 ZBTB22O15209 634 aa19.11■□□□□ 0.65
LINC00461-206ENST00000506664 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
LINC00461-206ENST00000506664 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
LINC00461-206ENST00000506664 CAPN15O75808 1086 aa18.96■□□□□ 0.63
LINC00461-206ENST00000506664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
LINC00461-206ENST00000506664 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
LINC00461-206ENST00000506664 APLP2Q06481 763 aa18.92■□□□□ 0.62
LINC00461-206ENST00000506664 DSG3P32926 999 aa18.86■□□□□ 0.61
LINC00461-206ENST00000506664 SAMD1Q6SPF0 538 aaPredicted RBP18.83■□□□□ 0.6
LINC00461-206ENST00000506664 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
LINC00461-206ENST00000506664 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
LINC00461-206ENST00000506664 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
LINC00461-206ENST00000506664 ABCB7O75027 752 aa18.5■□□□□ 0.55
LINC00461-206ENST00000506664 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
LINC00461-206ENST00000506664 POLA2Q14181 598 aa18.24■□□□□ 0.51
LINC00461-206ENST00000506664 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
LINC00461-206ENST00000506664 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
LINC00461-206ENST00000506664 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
LINC00461-206ENST00000506664 POTEHQ6S545 545 aa17.8■□□□□ 0.44
LINC00461-206ENST00000506664 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
LINC00461-206ENST00000506664 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
LINC00461-206ENST00000506664 FBLN2P98095 1184 aa17.56■□□□□ 0.4
LINC00461-206ENST00000506664 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
LINC00461-206ENST00000506664 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
LINC00461-206ENST00000506664 SPDYE2BA6NHP3 402 aa17.42■□□□□ 0.38
LINC00461-206ENST00000506664 SPDYE6P0CI01 402 aa17.42■□□□□ 0.38
LINC00461-206ENST00000506664 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
LINC00461-206ENST00000506664 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
LINC00461-206ENST00000506664 FKBP8Q14318 412 aa17.4■□□□□ 0.38
LINC00461-206ENST00000506664 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
LINC00461-206ENST00000506664 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
LINC00461-206ENST00000506664 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
LINC00461-206ENST00000506664 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
LINC00461-206ENST00000506664 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00461-206ENST00000506664 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
LINC00461-206ENST00000506664 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
LINC00461-206ENST00000506664 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC00461-206ENST00000506664 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
LINC00461-206ENST00000506664 PROM2Q8N271 834 aa16.8■□□□□ 0.28
LINC00461-206ENST00000506664 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
LINC00461-206ENST00000506664 SP7Q8TDD2 431 aaPredicted RBP16.78■□□□□ 0.28
LINC00461-206ENST00000506664 HAX1O00165 279 aa16.75■□□□□ 0.27
LINC00461-206ENST00000506664 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
LINC00461-206ENST00000506664 FBXO3Q9UK99 471 aa16.65■□□□□ 0.26
LINC00461-206ENST00000506664 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
LINC00461-206ENST00000506664 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
LINC00461-206ENST00000506664 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
LINC00461-206ENST00000506664 EVX2Q03828 476 aa16.54■□□□□ 0.24
LINC00461-206ENST00000506664 NISCHQ9Y2I1 1504 aa16.45■□□□□ 0.22
LINC00461-206ENST00000506664 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
LINC00461-206ENST00000506664 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
LINC00461-206ENST00000506664 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
LINC00461-206ENST00000506664 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
LINC00461-206ENST00000506664 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
LINC00461-206ENST00000506664 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
LINC00461-206ENST00000506664 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
LINC00461-206ENST00000506664 GABBR2O75899 941 aa16.22■□□□□ 0.19
LINC00461-206ENST00000506664 CLCN6P51797 869 aa16.15■□□□□ 0.18
LINC00461-206ENST00000506664 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
LINC00461-206ENST00000506664 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
LINC00461-206ENST00000506664 MIER1Q8N108 512 aa16.12■□□□□ 0.17
LINC00461-206ENST00000506664 ZNF579Q8NAF0 562 aaKnown RBP16.09■□□□□ 0.17
LINC00461-206ENST00000506664 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00461-206ENST00000506664 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
LINC00461-206ENST00000506664 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
LINC00461-206ENST00000506664 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
LINC00461-206ENST00000506664 SPOCK2Q92563 424 aa15.99■□□□□ 0.15
LINC00461-206ENST00000506664 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms