RNA–Protein interactions for RNA: ENST00000505304.1

GPM6A-206, Transcript of glycoprotein M6A, humanhuman

TSL 4

Gene GPM6A, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-206ENST00000505304 CHIC1Q5VXU3 224 aa31.27■■■□□ 2.6
GPM6A-206ENST00000505304 AEBP2Q6ZN18 517 aaPredicted RBP30.89■■■□□ 2.54
GPM6A-206ENST00000505304 PHF23Q9BUL5 403 aaPredicted RBP27.55■■■□□ 2
GPM6A-206ENST00000505304 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
GPM6A-206ENST00000505304 PLPPR3Q6T4P5 718 aa25.89■■□□□ 1.74
GPM6A-206ENST00000505304 ADRA2BP18089 450 aa24.12■■□□□ 1.45
GPM6A-206ENST00000505304 FOXD1Q16676 465 aa24.06■■□□□ 1.44
GPM6A-206ENST00000505304 PPP6R1Q9UPN7 881 aa23.95■■□□□ 1.42
GPM6A-206ENST00000505304 KCNA4P22459 653 aa23.58■■□□□ 1.37
GPM6A-206ENST00000505304 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
GPM6A-206ENST00000505304 PIAS4Q8N2W9 510 aaPredicted RBP23■■□□□ 1.27
GPM6A-206ENST00000505304 PPP4R3CPQ6ZMV5 832 aa22.92■■□□□ 1.26
GPM6A-206ENST00000505304 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
GPM6A-206ENST00000505304 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
GPM6A-206ENST00000505304 CSRNP3Q8WYN3 585 aa22.45■■□□□ 1.18
GPM6A-206ENST00000505304 NPM3O75607 178 aaKnown RBP22.29■■□□□ 1.16
GPM6A-206ENST00000505304 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
GPM6A-206ENST00000505304 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
GPM6A-206ENST00000505304 MSH5O43196 834 aa21.85■■□□□ 1.09
GPM6A-206ENST00000505304 ZBTB22O15209 634 aa21.68■■□□□ 1.06
GPM6A-206ENST00000505304 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
GPM6A-206ENST00000505304 MAPK8IP2Q13387 824 aaPredicted RBP21.44■■□□□ 1.02
GPM6A-206ENST00000505304 FOXD4L1Q9NU39 408 aa21.44■■□□□ 1.02
GPM6A-206ENST00000505304 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
GPM6A-206ENST00000505304 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
GPM6A-206ENST00000505304 HOXD11P31277 338 aaPredicted RBP20.98■□□□□ 0.95
GPM6A-206ENST00000505304 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
GPM6A-206ENST00000505304 MYCNP04198 464 aaPredicted RBP20.63■□□□□ 0.89
GPM6A-206ENST00000505304 ATXN8OSP0DMR3 200 aa20.62■□□□□ 0.89
GPM6A-206ENST00000505304 AMER1Q5JTC6 1135 aaPredicted RBP20.39■□□□□ 0.85
GPM6A-206ENST00000505304 RTN4Q9NQC3 1192 aaKnown RBP20.3■□□□□ 0.84
GPM6A-206ENST00000505304 FKBP8Q14318 412 aa20.27■□□□□ 0.84
GPM6A-206ENST00000505304 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
GPM6A-206ENST00000505304 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
GPM6A-206ENST00000505304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.8
GPM6A-206ENST00000505304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
GPM6A-206ENST00000505304 HNRNPUL2Q1KMD3 747 aaKnown RBP19.99■□□□□ 0.79
GPM6A-206ENST00000505304 SAMD1Q6SPF0 538 aaPredicted RBP19.95■□□□□ 0.78
GPM6A-206ENST00000505304 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
GPM6A-206ENST00000505304 U3KPZ7 1027 aaPredicted RBP19.79■□□□□ 0.76
GPM6A-206ENST00000505304 APLP2Q06481 763 aa19.56■□□□□ 0.72
GPM6A-206ENST00000505304 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
GPM6A-206ENST00000505304 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
GPM6A-206ENST00000505304 FBXO3Q9UK99 471 aa19.31■□□□□ 0.68
GPM6A-206ENST00000505304 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
GPM6A-206ENST00000505304 FBLN2P98095 1184 aa19.11■□□□□ 0.65
GPM6A-206ENST00000505304 MKRN4PQ13434 485 aaPredicted RBP19.11■□□□□ 0.65
GPM6A-206ENST00000505304 PROM2Q8N271 834 aa19.07■□□□□ 0.64
GPM6A-206ENST00000505304 VASPP50552 380 aaPredicted RBP18.99■□□□□ 0.63
GPM6A-206ENST00000505304 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
GPM6A-206ENST00000505304 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
GPM6A-206ENST00000505304 POLA2Q14181 598 aa18.89■□□□□ 0.61
GPM6A-206ENST00000505304 CAPN15O75808 1086 aa18.82■□□□□ 0.6
GPM6A-206ENST00000505304 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
GPM6A-206ENST00000505304 ZBTB12Q9Y330 459 aaPredicted RBP18.77■□□□□ 0.6
GPM6A-206ENST00000505304 PLCB2Q00722 1185 aa18.76■□□□□ 0.59
GPM6A-206ENST00000505304 IFNLR1Q8IU57 520 aaPredicted RBP18.76■□□□□ 0.59
GPM6A-206ENST00000505304 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
GPM6A-206ENST00000505304 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
GPM6A-206ENST00000505304 PKD2Q13563 968 aa18.54■□□□□ 0.56
GPM6A-206ENST00000505304 ABCB7O75027 752 aa18.53■□□□□ 0.56
GPM6A-206ENST00000505304 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
GPM6A-206ENST00000505304 KLHL34Q8N239 644 aa18.42■□□□□ 0.54
GPM6A-206ENST00000505304 SPOCK2Q92563 424 aa18.42■□□□□ 0.54
GPM6A-206ENST00000505304 STAG3Q9UJ98 1225 aa18.39■□□□□ 0.53
GPM6A-206ENST00000505304 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
GPM6A-206ENST00000505304 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
GPM6A-206ENST00000505304 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
GPM6A-206ENST00000505304 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
GPM6A-206ENST00000505304 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
GPM6A-206ENST00000505304 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
GPM6A-206ENST00000505304 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
GPM6A-206ENST00000505304 SSUH2Q9Y2M2 353 aa18.25■□□□□ 0.51
GPM6A-206ENST00000505304 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
GPM6A-206ENST00000505304 DSG3P32926 999 aa18.23■□□□□ 0.51
GPM6A-206ENST00000505304 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
GPM6A-206ENST00000505304 BBXQ8WY36 941 aaPredicted RBP18.21■□□□□ 0.51
GPM6A-206ENST00000505304 BCANQ96GW7 911 aa18.21■□□□□ 0.51
GPM6A-206ENST00000505304 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
GPM6A-206ENST00000505304 MIER1Q8N108 512 aa18.13■□□□□ 0.49
GPM6A-206ENST00000505304 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
GPM6A-206ENST00000505304 PAXIP1Q6ZW49 1069 aaPredicted RBP18.05■□□□□ 0.48
GPM6A-206ENST00000505304 PLEKHG5O94827 1062 aa18.04■□□□□ 0.48
GPM6A-206ENST00000505304 RGL2O15211 777 aa18.03■□□□□ 0.48
GPM6A-206ENST00000505304 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
GPM6A-206ENST00000505304 CFAP44Q96MT7 982 aa18■□□□□ 0.47
GPM6A-206ENST00000505304 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
GPM6A-206ENST00000505304 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
GPM6A-206ENST00000505304 SPRYD3Q8NCJ5 442 aa17.91■□□□□ 0.46
GPM6A-206ENST00000505304 KDM2AQ9Y2K7 1162 aa17.9■□□□□ 0.46
GPM6A-206ENST00000505304 TAOK2Q9UL54 1235 aa17.89■□□□□ 0.45
GPM6A-206ENST00000505304 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
GPM6A-206ENST00000505304 CHGAP10645 457 aaKnown RBP17.83■□□□□ 0.44
GPM6A-206ENST00000505304 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
GPM6A-206ENST00000505304 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
GPM6A-206ENST00000505304 GSE1Q14687 1217 aa17.69■□□□□ 0.42
GPM6A-206ENST00000505304 HS6ST3Q8IZP7 471 aa17.68■□□□□ 0.42
GPM6A-206ENST00000505304 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
GPM6A-206ENST00000505304 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
GPM6A-206ENST00000505304 NUBP1P53384 320 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms