RNA–Protein interactions for RNA: ENST00000505230.1

CCNH-204, Transcript of cyclin H, humanhuman

TSL 2

Gene CCNH, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-204ENST00000505230 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
CCNH-204ENST00000505230 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.5
CCNH-204ENST00000505230 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
CCNH-204ENST00000505230 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
CCNH-204ENST00000505230 FOXD1Q16676 465 aa20.89■□□□□ 0.93
CCNH-204ENST00000505230 POTEDQ86YR6 584 aa20.39■□□□□ 0.85
CCNH-204ENST00000505230 MSH5O43196 834 aa19.88■□□□□ 0.77
CCNH-204ENST00000505230 PIAS4Q8N2W9 510 aaPredicted RBP19.41■□□□□ 0.7
CCNH-204ENST00000505230 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
CCNH-204ENST00000505230 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
CCNH-204ENST00000505230 ADRA2BP18089 450 aa18.93■□□□□ 0.62
CCNH-204ENST00000505230 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
CCNH-204ENST00000505230 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
CCNH-204ENST00000505230 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
CCNH-204ENST00000505230 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
CCNH-204ENST00000505230 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
CCNH-204ENST00000505230 RNF39Q9H2S5 420 aa16.84■□□□□ 0.29
CCNH-204ENST00000505230 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
CCNH-204ENST00000505230 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
CCNH-204ENST00000505230 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
CCNH-204ENST00000505230 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
CCNH-204ENST00000505230 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
CCNH-204ENST00000505230 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
CCNH-204ENST00000505230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.15
CCNH-204ENST00000505230 POTEHQ6S545 545 aa15.88■□□□□ 0.13
CCNH-204ENST00000505230 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
CCNH-204ENST00000505230 DSG3P32926 999 aa15.56■□□□□ 0.08
CCNH-204ENST00000505230 CAPN15O75808 1086 aa15.55■□□□□ 0.08
CCNH-204ENST00000505230 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
CCNH-204ENST00000505230 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
CCNH-204ENST00000505230 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
CCNH-204ENST00000505230 APLP2Q06481 763 aa15.18■□□□□ 0.02
CCNH-204ENST00000505230 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
CCNH-204ENST00000505230 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
CCNH-204ENST00000505230 ABCB7O75027 752 aa15.09■□□□□ 0.01
CCNH-204ENST00000505230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
CCNH-204ENST00000505230 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
CCNH-204ENST00000505230 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
CCNH-204ENST00000505230 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
CCNH-204ENST00000505230 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
CCNH-204ENST00000505230 CHRDL2Q6WN34 429 aa14.81□□□□□ -0.04
CCNH-204ENST00000505230 KCNA4P22459 653 aa14.66□□□□□ -0.06
CCNH-204ENST00000505230 SP7Q8TDD2 431 aaPredicted RBP14.59□□□□□ -0.07
CCNH-204ENST00000505230 POLA2Q14181 598 aa14.58□□□□□ -0.08
CCNH-204ENST00000505230 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
CCNH-204ENST00000505230 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
CCNH-204ENST00000505230 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
CCNH-204ENST00000505230 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
CCNH-204ENST00000505230 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
CCNH-204ENST00000505230 HAX1O00165 279 aa14.26□□□□□ -0.13
CCNH-204ENST00000505230 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCNH-204ENST00000505230 PITPNM1O00562 1244 aa14.11□□□□□ -0.15
CCNH-204ENST00000505230 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
CCNH-204ENST00000505230 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
CCNH-204ENST00000505230 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CCNH-204ENST00000505230 EVX2Q03828 476 aa13.93□□□□□ -0.18
CCNH-204ENST00000505230 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
CCNH-204ENST00000505230 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
CCNH-204ENST00000505230 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
CCNH-204ENST00000505230 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
CCNH-204ENST00000505230 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
CCNH-204ENST00000505230 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
CCNH-204ENST00000505230 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
CCNH-204ENST00000505230 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
CCNH-204ENST00000505230 LHX8Q68G74 356 aa13.69□□□□□ -0.22
CCNH-204ENST00000505230 FBLN2P98095 1184 aa13.68□□□□□ -0.22
CCNH-204ENST00000505230 GABBR2O75899 941 aa13.65□□□□□ -0.22
CCNH-204ENST00000505230 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
CCNH-204ENST00000505230 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
CCNH-204ENST00000505230 SSUH2Q9Y2M2 353 aa13.48□□□□□ -0.25
CCNH-204ENST00000505230 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
CCNH-204ENST00000505230 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CCNH-204ENST00000505230 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
CCNH-204ENST00000505230 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
CCNH-204ENST00000505230 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
CCNH-204ENST00000505230 CLCN6P51797 869 aa13.34□□□□□ -0.27
CCNH-204ENST00000505230 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
CCNH-204ENST00000505230 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
CCNH-204ENST00000505230 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCNH-204ENST00000505230 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
CCNH-204ENST00000505230 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
CCNH-204ENST00000505230 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
CCNH-204ENST00000505230 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
CCNH-204ENST00000505230 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
CCNH-204ENST00000505230 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
CCNH-204ENST00000505230 POTEMA6NI47 508 aa12.92□□□□□ -0.34
CCNH-204ENST00000505230 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
CCNH-204ENST00000505230 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
CCNH-204ENST00000505230 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
CCNH-204ENST00000505230 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
CCNH-204ENST00000505230 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
CCNH-204ENST00000505230 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
CCNH-204ENST00000505230 PCDH10Q9P2E7 1040 aa12.82□□□□□ -0.36
CCNH-204ENST00000505230 PHF12Q96QT6 1004 aa12.73□□□□□ -0.37
CCNH-204ENST00000505230 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCNH-204ENST00000505230 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
CCNH-204ENST00000505230 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
CCNH-204ENST00000505230 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
CCNH-204ENST00000505230 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
CCNH-204ENST00000505230 C7P10643 843 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms