RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
PROM1-205ENST00000504842 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
PROM1-205ENST00000504842 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
PROM1-205ENST00000504842 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
PROM1-205ENST00000504842 FOXD1Q16676 465 aa18.08■□□□□ 0.48
PROM1-205ENST00000504842 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
PROM1-205ENST00000504842 MSH5O43196 834 aa17.01■□□□□ 0.31
PROM1-205ENST00000504842 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
PROM1-205ENST00000504842 ADRA2BP18089 450 aa16.87■□□□□ 0.29
PROM1-205ENST00000504842 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
PROM1-205ENST00000504842 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
PROM1-205ENST00000504842 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
PROM1-205ENST00000504842 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
PROM1-205ENST00000504842 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
PROM1-205ENST00000504842 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
PROM1-205ENST00000504842 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
PROM1-205ENST00000504842 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
PROM1-205ENST00000504842 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
PROM1-205ENST00000504842 KCNA4P22459 653 aa14.72□□□□□ -0.05
PROM1-205ENST00000504842 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
PROM1-205ENST00000504842 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
PROM1-205ENST00000504842 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
PROM1-205ENST00000504842 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
PROM1-205ENST00000504842 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
PROM1-205ENST00000504842 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
PROM1-205ENST00000504842 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
PROM1-205ENST00000504842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
PROM1-205ENST00000504842 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
PROM1-205ENST00000504842 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
PROM1-205ENST00000504842 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
PROM1-205ENST00000504842 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PROM1-205ENST00000504842 CAPN15O75808 1086 aa13.74□□□□□ -0.21
PROM1-205ENST00000504842 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
PROM1-205ENST00000504842 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
PROM1-205ENST00000504842 APLP2Q06481 763 aa13.57□□□□□ -0.24
PROM1-205ENST00000504842 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
PROM1-205ENST00000504842 DSG3P32926 999 aa13.52□□□□□ -0.25
PROM1-205ENST00000504842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
PROM1-205ENST00000504842 ZBTB22O15209 634 aa13.51□□□□□ -0.25
PROM1-205ENST00000504842 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
PROM1-205ENST00000504842 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
PROM1-205ENST00000504842 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
PROM1-205ENST00000504842 ABCB7O75027 752 aa13.4□□□□□ -0.26
PROM1-205ENST00000504842 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
PROM1-205ENST00000504842 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
PROM1-205ENST00000504842 POLA2Q14181 598 aa13.08□□□□□ -0.32
PROM1-205ENST00000504842 POTEHQ6S545 545 aa13.05□□□□□ -0.32
PROM1-205ENST00000504842 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
PROM1-205ENST00000504842 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
PROM1-205ENST00000504842 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
PROM1-205ENST00000504842 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
PROM1-205ENST00000504842 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
PROM1-205ENST00000504842 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
PROM1-205ENST00000504842 FKBP8Q14318 412 aa12.66□□□□□ -0.38
PROM1-205ENST00000504842 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
PROM1-205ENST00000504842 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
PROM1-205ENST00000504842 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
PROM1-205ENST00000504842 FBLN2P98095 1184 aa12.56□□□□□ -0.4
PROM1-205ENST00000504842 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
PROM1-205ENST00000504842 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
PROM1-205ENST00000504842 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
PROM1-205ENST00000504842 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
PROM1-205ENST00000504842 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
PROM1-205ENST00000504842 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
PROM1-205ENST00000504842 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
PROM1-205ENST00000504842 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
PROM1-205ENST00000504842 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
PROM1-205ENST00000504842 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.45
PROM1-205ENST00000504842 HAX1O00165 279 aa12.26□□□□□ -0.45
PROM1-205ENST00000504842 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
PROM1-205ENST00000504842 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
PROM1-205ENST00000504842 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
PROM1-205ENST00000504842 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
PROM1-205ENST00000504842 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
PROM1-205ENST00000504842 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
PROM1-205ENST00000504842 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
PROM1-205ENST00000504842 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
PROM1-205ENST00000504842 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
PROM1-205ENST00000504842 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
PROM1-205ENST00000504842 EVX2Q03828 476 aa11.94□□□□□ -0.5
PROM1-205ENST00000504842 PROM2Q8N271 834 aa11.87□□□□□ -0.51
PROM1-205ENST00000504842 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
PROM1-205ENST00000504842 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
PROM1-205ENST00000504842 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
PROM1-205ENST00000504842 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
PROM1-205ENST00000504842 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
PROM1-205ENST00000504842 GABBR2O75899 941 aa11.73□□□□□ -0.53
PROM1-205ENST00000504842 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
PROM1-205ENST00000504842 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
PROM1-205ENST00000504842 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
PROM1-205ENST00000504842 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
PROM1-205ENST00000504842 ZRANB1Q9UGI0 708 aa11.6□□□□□ -0.55
PROM1-205ENST00000504842 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
PROM1-205ENST00000504842 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
PROM1-205ENST00000504842 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
PROM1-205ENST00000504842 PKD2Q13563 968 aa11.55□□□□□ -0.56
PROM1-205ENST00000504842 CLCN6P51797 869 aa11.54□□□□□ -0.56
PROM1-205ENST00000504842 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
PROM1-205ENST00000504842 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
PROM1-205ENST00000504842 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms