RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
SMTN-221ENST00000504335 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SMTN-221ENST00000504335 HRCP23327 699 aa23.17■■□□□ 1.3
SMTN-221ENST00000504335 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
SMTN-221ENST00000504335 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
SMTN-221ENST00000504335 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
SMTN-221ENST00000504335 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.16
SMTN-221ENST00000504335 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
SMTN-221ENST00000504335 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
SMTN-221ENST00000504335 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
SMTN-221ENST00000504335 PRKCSHP14314 528 aaPredicted RBP21.62■■□□□ 1.05
SMTN-221ENST00000504335 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
SMTN-221ENST00000504335 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
SMTN-221ENST00000504335 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
SMTN-221ENST00000504335 ERICH6Q7L0X2 663 aa21.44■■□□□ 1.02
SMTN-221ENST00000504335 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
SMTN-221ENST00000504335 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
SMTN-221ENST00000504335 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
SMTN-221ENST00000504335 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
SMTN-221ENST00000504335 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
SMTN-221ENST00000504335 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
SMTN-221ENST00000504335 APLP2Q06481 763 aa21.18■□□□□ 0.98
SMTN-221ENST00000504335 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
SMTN-221ENST00000504335 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
SMTN-221ENST00000504335 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
SMTN-221ENST00000504335 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
SMTN-221ENST00000504335 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
SMTN-221ENST00000504335 CLSPNQ9HAW4 1339 aa20.47■□□□□ 0.87
SMTN-221ENST00000504335 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
SMTN-221ENST00000504335 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
SMTN-221ENST00000504335 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
SMTN-221ENST00000504335 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
SMTN-221ENST00000504335 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
SMTN-221ENST00000504335 SLC24A1O60721 1099 aa20.19■□□□□ 0.82
SMTN-221ENST00000504335 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
SMTN-221ENST00000504335 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
SMTN-221ENST00000504335 ANO8Q9HCE9 1232 aaPredicted RBP20.08■□□□□ 0.8
SMTN-221ENST00000504335 UBE2Q2Q8WVN8 375 aa20.07■□□□□ 0.8
SMTN-221ENST00000504335 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
SMTN-221ENST00000504335 ZNF316A6NFI3 1004 aaPredicted RBP20.05■□□□□ 0.8
SMTN-221ENST00000504335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
SMTN-221ENST00000504335 MIER1Q8N108 512 aa19.93■□□□□ 0.78
SMTN-221ENST00000504335 ERICH6BQ5W0A0 696 aa19.93■□□□□ 0.78
SMTN-221ENST00000504335 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
SMTN-221ENST00000504335 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
SMTN-221ENST00000504335 RBM19Q9Y4C8 960 aaKnown RBP19.8■□□□□ 0.76
SMTN-221ENST00000504335 SALL2Q9Y467 1007 aaPredicted RBP19.74■□□□□ 0.75
SMTN-221ENST00000504335 DEKP35659 375 aaKnown RBP19.72■□□□□ 0.75
SMTN-221ENST00000504335 MSH5O43196 834 aa19.66■□□□□ 0.74
SMTN-221ENST00000504335 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
SMTN-221ENST00000504335 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
SMTN-221ENST00000504335 PKNOX2Q96KN3 472 aa19.54■□□□□ 0.72
SMTN-221ENST00000504335 BCANQ96GW7 911 aa19.39■□□□□ 0.7
SMTN-221ENST00000504335 FKBP8Q14318 412 aa19.37■□□□□ 0.69
SMTN-221ENST00000504335 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
SMTN-221ENST00000504335 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
SMTN-221ENST00000504335 NEFLP07196 543 aa19.3■□□□□ 0.68
SMTN-221ENST00000504335 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
SMTN-221ENST00000504335 IL27Q8NEV9 243 aa19.2■□□□□ 0.66
SMTN-221ENST00000504335 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
SMTN-221ENST00000504335 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
SMTN-221ENST00000504335 ITGAEP38570 1179 aa19.11■□□□□ 0.65
SMTN-221ENST00000504335 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
SMTN-221ENST00000504335 RTN4Q9NQC3 1192 aaKnown RBP19.1■□□□□ 0.65
SMTN-221ENST00000504335 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
SMTN-221ENST00000504335 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
SMTN-221ENST00000504335 NBR1Q14596 966 aa19.06■□□□□ 0.64
SMTN-221ENST00000504335 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
SMTN-221ENST00000504335 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
SMTN-221ENST00000504335 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
SMTN-221ENST00000504335 ZMYND15Q9H091 742 aa18.89■□□□□ 0.62
SMTN-221ENST00000504335 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
SMTN-221ENST00000504335 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
SMTN-221ENST00000504335 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.61
SMTN-221ENST00000504335 WASHC2CQ9Y4E1 1318 aa18.82■□□□□ 0.6
SMTN-221ENST00000504335 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
SMTN-221ENST00000504335 USP35Q9P2H5 1018 aa18.8■□□□□ 0.6
SMTN-221ENST00000504335 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
SMTN-221ENST00000504335 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
SMTN-221ENST00000504335 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
SMTN-221ENST00000504335 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
SMTN-221ENST00000504335 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
SMTN-221ENST00000504335 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
SMTN-221ENST00000504335 ABCC9O60706 1549 aa18.69■□□□□ 0.58
SMTN-221ENST00000504335 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
SMTN-221ENST00000504335 CCER2I3L3R5 266 aa18.64■□□□□ 0.57
SMTN-221ENST00000504335 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
SMTN-221ENST00000504335 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
SMTN-221ENST00000504335 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
SMTN-221ENST00000504335 NEFMP07197 916 aa18.6■□□□□ 0.57
SMTN-221ENST00000504335 FGD1P98174 961 aa18.59■□□□□ 0.57
SMTN-221ENST00000504335 PDE4CQ08493 712 aa18.59■□□□□ 0.57
SMTN-221ENST00000504335 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
SMTN-221ENST00000504335 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
SMTN-221ENST00000504335 AAMPQ13685 434 aa18.53■□□□□ 0.56
SMTN-221ENST00000504335 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
SMTN-221ENST00000504335 RRP9O43818 475 aaKnown RBP18.52■□□□□ 0.55
SMTN-221ENST00000504335 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
SMTN-221ENST00000504335 GSE1Q14687 1217 aa18.51■□□□□ 0.55
SMTN-221ENST00000504335 DHX57Q6P158 1386 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms