RNA–Protein interactions for RNA: ENST00000503421.5

CCSER1-203, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 5

Gene CCSER1, Length 445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-203ENST00000503421 AEBP2Q6ZN18 517 aaPredicted RBP15.62■□□□□ 0.09
CCSER1-203ENST00000503421 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
CCSER1-203ENST00000503421 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
CCSER1-203ENST00000503421 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
CCSER1-203ENST00000503421 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
CCSER1-203ENST00000503421 FOXD1Q16676 465 aa12.62□□□□□ -0.39
CCSER1-203ENST00000503421 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
CCSER1-203ENST00000503421 MSH5O43196 834 aa12.03□□□□□ -0.48
CCSER1-203ENST00000503421 PPP6R1Q9UPN7 881 aa11.73□□□□□ -0.53
CCSER1-203ENST00000503421 ADRA2BP18089 450 aa11.7□□□□□ -0.54
CCSER1-203ENST00000503421 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
CCSER1-203ENST00000503421 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
CCSER1-203ENST00000503421 KCNA4P22459 653 aa10.98□□□□□ -0.65
CCSER1-203ENST00000503421 CACNB1Q02641 598 aaPredicted RBP10.97□□□□□ -0.65
CCSER1-203ENST00000503421 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
CCSER1-203ENST00000503421 SCAF1Q9H7N4 1312 aaKnown RBP10.83□□□□□ -0.68
CCSER1-203ENST00000503421 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
CCSER1-203ENST00000503421 NPM3O75607 178 aaKnown RBP10.63□□□□□ -0.71
CCSER1-203ENST00000503421 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
CCSER1-203ENST00000503421 SLC4A1APQ9BWU0 796 aaKnown RBP10.52□□□□□ -0.73
CCSER1-203ENST00000503421 DNAJC5BQ9UF47 199 aa10.5□□□□□ -0.73
CCSER1-203ENST00000503421 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-203ENST00000503421 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
CCSER1-203ENST00000503421 POTEHQ6S545 545 aa10.4□□□□□ -0.74
CCSER1-203ENST00000503421 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
CCSER1-203ENST00000503421 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
CCSER1-203ENST00000503421 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
CCSER1-203ENST00000503421 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
CCSER1-203ENST00000503421 ZBTB22O15209 634 aa10.1□□□□□ -0.79
CCSER1-203ENST00000503421 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
CCSER1-203ENST00000503421 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
CCSER1-203ENST00000503421 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
CCSER1-203ENST00000503421 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
CCSER1-203ENST00000503421 MYCNP04198 464 aaPredicted RBP9.85□□□□□ -0.83
CCSER1-203ENST00000503421 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
CCSER1-203ENST00000503421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCSER1-203ENST00000503421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
CCSER1-203ENST00000503421 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
CCSER1-203ENST00000503421 SAMD1Q6SPF0 538 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-203ENST00000503421 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
CCSER1-203ENST00000503421 APLP2Q06481 763 aa9.56□□□□□ -0.88
CCSER1-203ENST00000503421 ATF5Q9Y2D1 282 aaPredicted RBP9.49□□□□□ -0.89
CCSER1-203ENST00000503421 ZNF219Q9P2Y4 722 aaPredicted RBP9.37□□□□□ -0.91
CCSER1-203ENST00000503421 DSG3P32926 999 aa9.31□□□□□ -0.92
CCSER1-203ENST00000503421 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
CCSER1-203ENST00000503421 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
CCSER1-203ENST00000503421 CAPN15O75808 1086 aa9.22□□□□□ -0.93
CCSER1-203ENST00000503421 FKBP8Q14318 412 aa9.22□□□□□ -0.93
CCSER1-203ENST00000503421 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.94
CCSER1-203ENST00000503421 POLA2Q14181 598 aa9.17□□□□□ -0.94
CCSER1-203ENST00000503421 FBLN2P98095 1184 aa9.14□□□□□ -0.95
CCSER1-203ENST00000503421 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-203ENST00000503421 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-203ENST00000503421 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
CCSER1-203ENST00000503421 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
CCSER1-203ENST00000503421 PROM2Q8N271 834 aa9.03□□□□□ -0.96
CCSER1-203ENST00000503421 ABCB7O75027 752 aa9.02□□□□□ -0.97
CCSER1-203ENST00000503421 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
CCSER1-203ENST00000503421 FBXO3Q9UK99 471 aa8.94□□□□□ -0.98
CCSER1-203ENST00000503421 SPDYE2BA6NHP3 402 aa8.89□□□□□ -0.99
CCSER1-203ENST00000503421 SPDYE6P0CI01 402 aa8.89□□□□□ -0.99
CCSER1-203ENST00000503421 SPDYE2Q495Y8 402 aa8.89□□□□□ -0.99
CCSER1-203ENST00000503421 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
CCSER1-203ENST00000503421 SSUH2Q9Y2M2 353 aa8.84□□□□□ -0.99
CCSER1-203ENST00000503421 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
CCSER1-203ENST00000503421 OSCARQ8IYS5 282 aa8.81□□□□□ -1
CCSER1-203ENST00000503421 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
CCSER1-203ENST00000503421 VASPP50552 380 aaPredicted RBP8.75□□□□□ -1.01
CCSER1-203ENST00000503421 STAG3Q9UJ98 1225 aa8.75□□□□□ -1.01
CCSER1-203ENST00000503421 RBM42Q9BTD8 480 aaKnown RBP8.73□□□□□ -1.01
CCSER1-203ENST00000503421 HAX1O00165 279 aa8.72□□□□□ -1.01
CCSER1-203ENST00000503421 EVX2Q03828 476 aa8.72□□□□□ -1.01
CCSER1-203ENST00000503421 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCSER1-203ENST00000503421 LHX8Q68G74 356 aa8.68□□□□□ -1.02
CCSER1-203ENST00000503421 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
CCSER1-203ENST00000503421 AKT1S1Q96B36 256 aa8.64□□□□□ -1.03
CCSER1-203ENST00000503421 IFNLR1Q8IU57 520 aaPredicted RBP8.63□□□□□ -1.03
CCSER1-203ENST00000503421 SPDYE1Q8NFV5 336 aaPredicted RBP8.55□□□□□ -1.04
CCSER1-203ENST00000503421 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
CCSER1-203ENST00000503421 MIER1Q8N108 512 aa8.52□□□□□ -1.05
CCSER1-203ENST00000503421 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
CCSER1-203ENST00000503421 ZBTB47Q9UFB7 747 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-203ENST00000503421 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
CCSER1-203ENST00000503421 REM2Q8IYK8 340 aaPredicted RBP8.5□□□□□ -1.05
CCSER1-203ENST00000503421 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
CCSER1-203ENST00000503421 FXR2P51116 673 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCSER1-203ENST00000503421 PKD2Q13563 968 aa8.44□□□□□ -1.06
CCSER1-203ENST00000503421 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
CCSER1-203ENST00000503421 PRR29P0C7W0 189 aa8.42□□□□□ -1.06
CCSER1-203ENST00000503421 CLEC11AQ9Y240 323 aa8.39□□□□□ -1.07
CCSER1-203ENST00000503421 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
CCSER1-203ENST00000503421 PITPNM1O00562 1244 aa8.37□□□□□ -1.07
CCSER1-203ENST00000503421 TRIM41Q8WV44 630 aa8.37□□□□□ -1.07
CCSER1-203ENST00000503421 GABBR2O75899 941 aa8.35□□□□□ -1.07
CCSER1-203ENST00000503421 MNX1P50219 401 aaPredicted RBP8.34□□□□□ -1.07
CCSER1-203ENST00000503421 NUBP1P53384 320 aa8.33□□□□□ -1.08
CCSER1-203ENST00000503421 ECM2O94769 699 aaPredicted RBP8.32□□□□□ -1.08
CCSER1-203ENST00000503421 GSE1Q14687 1217 aa8.32□□□□□ -1.08
CCSER1-203ENST00000503421 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCSER1-203ENST00000503421 CIZ1Q9ULV3 898 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms