RNA–Protein interactions for RNA: ENST00000502377.1

CHRNA9-202, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

TSL 3

Gene CHRNA9, Length 622 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-202ENST00000502377 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
CHRNA9-202ENST00000502377 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
CHRNA9-202ENST00000502377 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
CHRNA9-202ENST00000502377 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
CHRNA9-202ENST00000502377 FOXD1Q16676 465 aa15.59■□□□□ 0.09
CHRNA9-202ENST00000502377 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
CHRNA9-202ENST00000502377 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
CHRNA9-202ENST00000502377 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
CHRNA9-202ENST00000502377 MSH5O43196 834 aa14.63□□□□□ -0.07
CHRNA9-202ENST00000502377 ADRA2BP18089 450 aa14.62□□□□□ -0.07
CHRNA9-202ENST00000502377 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
CHRNA9-202ENST00000502377 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
CHRNA9-202ENST00000502377 NISCHQ9Y2I1 1504 aa13.49□□□□□ -0.25
CHRNA9-202ENST00000502377 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
CHRNA9-202ENST00000502377 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
CHRNA9-202ENST00000502377 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
CHRNA9-202ENST00000502377 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
CHRNA9-202ENST00000502377 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
CHRNA9-202ENST00000502377 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
CHRNA9-202ENST00000502377 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
CHRNA9-202ENST00000502377 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
CHRNA9-202ENST00000502377 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
CHRNA9-202ENST00000502377 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
CHRNA9-202ENST00000502377 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
CHRNA9-202ENST00000502377 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
CHRNA9-202ENST00000502377 KCNA4P22459 653 aa12.43□□□□□ -0.42
CHRNA9-202ENST00000502377 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
CHRNA9-202ENST00000502377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHRNA9-202ENST00000502377 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
CHRNA9-202ENST00000502377 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
CHRNA9-202ENST00000502377 CAPN15O75808 1086 aa11.82□□□□□ -0.52
CHRNA9-202ENST00000502377 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
CHRNA9-202ENST00000502377 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
CHRNA9-202ENST00000502377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
CHRNA9-202ENST00000502377 APLP2Q06481 763 aa11.79□□□□□ -0.52
CHRNA9-202ENST00000502377 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
CHRNA9-202ENST00000502377 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
CHRNA9-202ENST00000502377 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
CHRNA9-202ENST00000502377 DSG3P32926 999 aa11.69□□□□□ -0.54
CHRNA9-202ENST00000502377 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CHRNA9-202ENST00000502377 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
CHRNA9-202ENST00000502377 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
CHRNA9-202ENST00000502377 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
CHRNA9-202ENST00000502377 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
CHRNA9-202ENST00000502377 ABCB7O75027 752 aa11.51□□□□□ -0.57
CHRNA9-202ENST00000502377 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
CHRNA9-202ENST00000502377 ZBTB22O15209 634 aa11.46□□□□□ -0.57
CHRNA9-202ENST00000502377 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
CHRNA9-202ENST00000502377 POLA2Q14181 598 aa11.36□□□□□ -0.59
CHRNA9-202ENST00000502377 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
CHRNA9-202ENST00000502377 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
CHRNA9-202ENST00000502377 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
CHRNA9-202ENST00000502377 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
CHRNA9-202ENST00000502377 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
CHRNA9-202ENST00000502377 SHROOM4Q9ULL8 1493 aa11.07□□□□□ -0.64
CHRNA9-202ENST00000502377 POTEHQ6S545 545 aa11.05□□□□□ -0.64
CHRNA9-202ENST00000502377 MYO15BQ96JP2 1530 aa10.97□□□□□ -0.65
CHRNA9-202ENST00000502377 AKT1S1Q96B36 256 aa10.96□□□□□ -0.65
CHRNA9-202ENST00000502377 ABCC9O60706 1549 aa10.95□□□□□ -0.66
CHRNA9-202ENST00000502377 FBLN2P98095 1184 aa10.94□□□□□ -0.66
CHRNA9-202ENST00000502377 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
CHRNA9-202ENST00000502377 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
CHRNA9-202ENST00000502377 REM2Q8IYK8 340 aaPredicted RBP10.83□□□□□ -0.68
CHRNA9-202ENST00000502377 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
CHRNA9-202ENST00000502377 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
CHRNA9-202ENST00000502377 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
CHRNA9-202ENST00000502377 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
CHRNA9-202ENST00000502377 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
CHRNA9-202ENST00000502377 NACADO15069 1562 aa10.72□□□□□ -0.69
CHRNA9-202ENST00000502377 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
CHRNA9-202ENST00000502377 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
CHRNA9-202ENST00000502377 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
CHRNA9-202ENST00000502377 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.71
CHRNA9-202ENST00000502377 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
CHRNA9-202ENST00000502377 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
CHRNA9-202ENST00000502377 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
CHRNA9-202ENST00000502377 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHRNA9-202ENST00000502377 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CHRNA9-202ENST00000502377 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
CHRNA9-202ENST00000502377 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
CHRNA9-202ENST00000502377 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
CHRNA9-202ENST00000502377 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHRNA9-202ENST00000502377 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
CHRNA9-202ENST00000502377 EIF4G1Q04637 1599 aaKnown RBP10.49□□□□□ -0.73
CHRNA9-202ENST00000502377 HAX1O00165 279 aa10.46□□□□□ -0.73
CHRNA9-202ENST00000502377 HRCP23327 699 aa10.46□□□□□ -0.73
CHRNA9-202ENST00000502377 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
CHRNA9-202ENST00000502377 PRR29P0C7W0 189 aa10.43□□□□□ -0.74
CHRNA9-202ENST00000502377 WIZO95785 1651 aa10.41□□□□□ -0.74
CHRNA9-202ENST00000502377 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
CHRNA9-202ENST00000502377 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
CHRNA9-202ENST00000502377 SPDYE4A6NLX3 237 aa10.38□□□□□ -0.75
CHRNA9-202ENST00000502377 TOP2AP11388 1531 aaKnown RBP10.36□□□□□ -0.75
CHRNA9-202ENST00000502377 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
CHRNA9-202ENST00000502377 CECR2Q9BXF3 1484 aa10.32□□□□□ -0.76
CHRNA9-202ENST00000502377 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
CHRNA9-202ENST00000502377 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
CHRNA9-202ENST00000502377 FKBP8Q14318 412 aa10.29□□□□□ -0.76
CHRNA9-202ENST00000502377 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
CHRNA9-202ENST00000502377 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms