RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
RTN4IP1-203ENST00000498091 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
RTN4IP1-203ENST00000498091 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
RTN4IP1-203ENST00000498091 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
RTN4IP1-203ENST00000498091 FOXD1Q16676 465 aa13.05□□□□□ -0.32
RTN4IP1-203ENST00000498091 POTEDQ86YR6 584 aa13.01□□□□□ -0.33
RTN4IP1-203ENST00000498091 MSH5O43196 834 aa12.45□□□□□ -0.42
RTN4IP1-203ENST00000498091 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
RTN4IP1-203ENST00000498091 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
RTN4IP1-203ENST00000498091 ADRA2BP18089 450 aa11.98□□□□□ -0.49
RTN4IP1-203ENST00000498091 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
RTN4IP1-203ENST00000498091 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
RTN4IP1-203ENST00000498091 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
RTN4IP1-203ENST00000498091 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
RTN4IP1-203ENST00000498091 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
RTN4IP1-203ENST00000498091 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
RTN4IP1-203ENST00000498091 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
RTN4IP1-203ENST00000498091 HOXD11P31277 338 aaPredicted RBP10.5□□□□□ -0.73
RTN4IP1-203ENST00000498091 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
RTN4IP1-203ENST00000498091 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
RTN4IP1-203ENST00000498091 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
RTN4IP1-203ENST00000498091 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
RTN4IP1-203ENST00000498091 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
RTN4IP1-203ENST00000498091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.77
RTN4IP1-203ENST00000498091 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
RTN4IP1-203ENST00000498091 POTEHQ6S545 545 aa10.05□□□□□ -0.8
RTN4IP1-203ENST00000498091 NPM3O75607 178 aaKnown RBP9.93□□□□□ -0.82
RTN4IP1-203ENST00000498091 CAPN15O75808 1086 aa9.91□□□□□ -0.82
RTN4IP1-203ENST00000498091 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
RTN4IP1-203ENST00000498091 DSG3P32926 999 aa9.75□□□□□ -0.85
RTN4IP1-203ENST00000498091 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
RTN4IP1-203ENST00000498091 APLP2Q06481 763 aa9.74□□□□□ -0.85
RTN4IP1-203ENST00000498091 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
RTN4IP1-203ENST00000498091 ZNF219Q9P2Y4 722 aaPredicted RBP9.63□□□□□ -0.87
RTN4IP1-203ENST00000498091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.62□□□□□ -0.87
RTN4IP1-203ENST00000498091 HNRNPUL2Q1KMD3 747 aaKnown RBP9.62□□□□□ -0.87
RTN4IP1-203ENST00000498091 ABCB7O75027 752 aa9.6□□□□□ -0.87
RTN4IP1-203ENST00000498091 KCNA4P22459 653 aa9.5□□□□□ -0.89
RTN4IP1-203ENST00000498091 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
RTN4IP1-203ENST00000498091 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
RTN4IP1-203ENST00000498091 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
RTN4IP1-203ENST00000498091 POLA2Q14181 598 aa9.29□□□□□ -0.92
RTN4IP1-203ENST00000498091 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
RTN4IP1-203ENST00000498091 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
RTN4IP1-203ENST00000498091 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
RTN4IP1-203ENST00000498091 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
RTN4IP1-203ENST00000498091 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
RTN4IP1-203ENST00000498091 HAX1O00165 279 aa9.01□□□□□ -0.97
RTN4IP1-203ENST00000498091 SLC4A1APQ9BWU0 796 aaKnown RBP9.01□□□□□ -0.97
RTN4IP1-203ENST00000498091 FOXD4L1Q9NU39 408 aa9.01□□□□□ -0.97
RTN4IP1-203ENST00000498091 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
RTN4IP1-203ENST00000498091 OSCARQ8IYS5 282 aa8.99□□□□□ -0.97
RTN4IP1-203ENST00000498091 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
RTN4IP1-203ENST00000498091 ATF5Q9Y2D1 282 aaPredicted RBP8.93□□□□□ -0.98
RTN4IP1-203ENST00000498091 PITPNM1O00562 1244 aa8.9□□□□□ -0.98
RTN4IP1-203ENST00000498091 FBLN2P98095 1184 aa8.86□□□□□ -0.99
RTN4IP1-203ENST00000498091 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -1
RTN4IP1-203ENST00000498091 CLEC11AQ9Y240 323 aa8.8□□□□□ -1
RTN4IP1-203ENST00000498091 EVX2Q03828 476 aa8.79□□□□□ -1
RTN4IP1-203ENST00000498091 SPDYE2BA6NHP3 402 aa8.78□□□□□ -1
RTN4IP1-203ENST00000498091 SPDYE6P0CI01 402 aa8.78□□□□□ -1
RTN4IP1-203ENST00000498091 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
RTN4IP1-203ENST00000498091 SPDYE1Q8NFV5 336 aaPredicted RBP8.75□□□□□ -1.01
RTN4IP1-203ENST00000498091 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
RTN4IP1-203ENST00000498091 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
RTN4IP1-203ENST00000498091 ZNF692Q9BU19 519 aaPredicted RBP8.69□□□□□ -1.02
RTN4IP1-203ENST00000498091 EHMT2Q96KQ7 1210 aa8.68□□□□□ -1.02
RTN4IP1-203ENST00000498091 ZBTB22O15209 634 aa8.62□□□□□ -1.03
RTN4IP1-203ENST00000498091 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
RTN4IP1-203ENST00000498091 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
RTN4IP1-203ENST00000498091 C19orf67A6NJJ6 358 aa8.56□□□□□ -1.04
RTN4IP1-203ENST00000498091 LHX8Q68G74 356 aa8.56□□□□□ -1.04
RTN4IP1-203ENST00000498091 GABBR2O75899 941 aa8.54□□□□□ -1.04
RTN4IP1-203ENST00000498091 CHADLQ6NUI6 762 aa8.54□□□□□ -1.04
RTN4IP1-203ENST00000498091 SSUH2Q9Y2M2 353 aa8.53□□□□□ -1.04
RTN4IP1-203ENST00000498091 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
RTN4IP1-203ENST00000498091 MKRN4PQ13434 485 aaPredicted RBP8.5□□□□□ -1.05
RTN4IP1-203ENST00000498091 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
RTN4IP1-203ENST00000498091 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
RTN4IP1-203ENST00000498091 CLCN6P51797 869 aa8.4□□□□□ -1.06
RTN4IP1-203ENST00000498091 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
RTN4IP1-203ENST00000498091 POTEIP0CG38 1075 aa8.36□□□□□ -1.07
RTN4IP1-203ENST00000498091 NISCHQ9Y2I1 1504 aa8.34□□□□□ -1.07
RTN4IP1-203ENST00000498091 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
RTN4IP1-203ENST00000498091 PAK3O75914 559 aaPredicted RBP8.31□□□□□ -1.08
RTN4IP1-203ENST00000498091 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
RTN4IP1-203ENST00000498091 STAG3Q9UJ98 1225 aa8.29□□□□□ -1.08
RTN4IP1-203ENST00000498091 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
RTN4IP1-203ENST00000498091 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
RTN4IP1-203ENST00000498091 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
RTN4IP1-203ENST00000498091 CREBZFQ9NS37 354 aa8.15□□□□□ -1.1
RTN4IP1-203ENST00000498091 SPDYE4A6NLX3 237 aa8.13□□□□□ -1.11
RTN4IP1-203ENST00000498091 OTUD5Q96G74 571 aa8.12□□□□□ -1.11
RTN4IP1-203ENST00000498091 POTEMA6NI47 508 aa8.1□□□□□ -1.11
RTN4IP1-203ENST00000498091 PHF12Q96QT6 1004 aa8.1□□□□□ -1.11
RTN4IP1-203ENST00000498091 POTEB2H3BUK9 544 aa8.09□□□□□ -1.11
RTN4IP1-203ENST00000498091 POTEGQ6S5H5 508 aa8.05□□□□□ -1.12
RTN4IP1-203ENST00000498091 MAMSTRQ6ZN01 415 aa8.03□□□□□ -1.12
RTN4IP1-203ENST00000498091 SLC39A7Q92504 469 aa8.02□□□□□ -1.13
RTN4IP1-203ENST00000498091 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms