RNA–Protein interactions for RNA: ENST00000496410.1

RBM48-203, Transcript of RNA binding motif protein 48, humanhuman

TSL 3

Gene RBM48, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-203ENST00000496410 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
RBM48-203ENST00000496410 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
RBM48-203ENST00000496410 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
RBM48-203ENST00000496410 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
RBM48-203ENST00000496410 FOXD1Q16676 465 aa19.26■□□□□ 0.67
RBM48-203ENST00000496410 MSH5O43196 834 aa18.14■□□□□ 0.49
RBM48-203ENST00000496410 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
RBM48-203ENST00000496410 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
RBM48-203ENST00000496410 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
RBM48-203ENST00000496410 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
RBM48-203ENST00000496410 ADRA2BP18089 450 aa17.74■□□□□ 0.43
RBM48-203ENST00000496410 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
RBM48-203ENST00000496410 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
RBM48-203ENST00000496410 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
RBM48-203ENST00000496410 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
RBM48-203ENST00000496410 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
RBM48-203ENST00000496410 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
RBM48-203ENST00000496410 KCNA4P22459 653 aa15.62■□□□□ 0.09
RBM48-203ENST00000496410 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
RBM48-203ENST00000496410 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
RBM48-203ENST00000496410 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
RBM48-203ENST00000496410 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
RBM48-203ENST00000496410 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
RBM48-203ENST00000496410 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
RBM48-203ENST00000496410 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
RBM48-203ENST00000496410 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
RBM48-203ENST00000496410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
RBM48-203ENST00000496410 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
RBM48-203ENST00000496410 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
RBM48-203ENST00000496410 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
RBM48-203ENST00000496410 ZBTB22O15209 634 aa14.43□□□□□ -0.1
RBM48-203ENST00000496410 CAPN15O75808 1086 aa14.4□□□□□ -0.1
RBM48-203ENST00000496410 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
RBM48-203ENST00000496410 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
RBM48-203ENST00000496410 DSG3P32926 999 aa14.37□□□□□ -0.11
RBM48-203ENST00000496410 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
RBM48-203ENST00000496410 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
RBM48-203ENST00000496410 POTEHQ6S545 545 aa14.16□□□□□ -0.14
RBM48-203ENST00000496410 APLP2Q06481 763 aa14.12□□□□□ -0.15
RBM48-203ENST00000496410 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
RBM48-203ENST00000496410 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
RBM48-203ENST00000496410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
RBM48-203ENST00000496410 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
RBM48-203ENST00000496410 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
RBM48-203ENST00000496410 ABCB7O75027 752 aa14.03□□□□□ -0.16
RBM48-203ENST00000496410 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
RBM48-203ENST00000496410 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
RBM48-203ENST00000496410 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
RBM48-203ENST00000496410 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
RBM48-203ENST00000496410 POLA2Q14181 598 aa13.68□□□□□ -0.22
RBM48-203ENST00000496410 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
RBM48-203ENST00000496410 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
RBM48-203ENST00000496410 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
RBM48-203ENST00000496410 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
RBM48-203ENST00000496410 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
RBM48-203ENST00000496410 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
RBM48-203ENST00000496410 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
RBM48-203ENST00000496410 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
RBM48-203ENST00000496410 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
RBM48-203ENST00000496410 FBLN2P98095 1184 aa13.06□□□□□ -0.32
RBM48-203ENST00000496410 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBM48-203ENST00000496410 HAX1O00165 279 aa12.99□□□□□ -0.33
RBM48-203ENST00000496410 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
RBM48-203ENST00000496410 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
RBM48-203ENST00000496410 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
RBM48-203ENST00000496410 FKBP8Q14318 412 aa12.85□□□□□ -0.35
RBM48-203ENST00000496410 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
RBM48-203ENST00000496410 EVX2Q03828 476 aa12.8□□□□□ -0.36
RBM48-203ENST00000496410 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
RBM48-203ENST00000496410 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
RBM48-203ENST00000496410 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
RBM48-203ENST00000496410 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
RBM48-203ENST00000496410 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
RBM48-203ENST00000496410 PROM2Q8N271 834 aa12.65□□□□□ -0.38
RBM48-203ENST00000496410 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
RBM48-203ENST00000496410 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
RBM48-203ENST00000496410 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
RBM48-203ENST00000496410 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
RBM48-203ENST00000496410 GABBR2O75899 941 aa12.5□□□□□ -0.41
RBM48-203ENST00000496410 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
RBM48-203ENST00000496410 LHX8Q68G74 356 aa12.34□□□□□ -0.43
RBM48-203ENST00000496410 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
RBM48-203ENST00000496410 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
RBM48-203ENST00000496410 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
RBM48-203ENST00000496410 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
RBM48-203ENST00000496410 CLCN6P51797 869 aa12.24□□□□□ -0.45
RBM48-203ENST00000496410 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
RBM48-203ENST00000496410 VASPP50552 380 aaPredicted RBP12.2□□□□□ -0.46
RBM48-203ENST00000496410 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
RBM48-203ENST00000496410 MIER1Q8N108 512 aa12.15□□□□□ -0.46
RBM48-203ENST00000496410 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
RBM48-203ENST00000496410 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
RBM48-203ENST00000496410 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
RBM48-203ENST00000496410 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
RBM48-203ENST00000496410 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
RBM48-203ENST00000496410 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
RBM48-203ENST00000496410 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
RBM48-203ENST00000496410 ABCC9O60706 1549 aa11.99□□□□□ -0.49
RBM48-203ENST00000496410 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
RBM48-203ENST00000496410 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms