RNA–Protein interactions for RNA: ENST00000492188.1

SPECC1-210, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 2

Gene SPECC1, Length 1,190 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-210ENST00000492188 AEBP2Q6ZN18 517 aaPredicted RBP31.1■■■□□ 2.57
SPECC1-210ENST00000492188 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
SPECC1-210ENST00000492188 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
SPECC1-210ENST00000492188 SENP3Q9H4L4 574 aaPredicted RBP26.41■■□□□ 1.82
SPECC1-210ENST00000492188 FOXD1Q16676 465 aa24.56■■□□□ 1.52
SPECC1-210ENST00000492188 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
SPECC1-210ENST00000492188 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
SPECC1-210ENST00000492188 ADRA2BP18089 450 aa23.34■■□□□ 1.33
SPECC1-210ENST00000492188 PIAS4Q8N2W9 510 aaPredicted RBP23.06■■□□□ 1.28
SPECC1-210ENST00000492188 MSH5O43196 834 aa22.76■■□□□ 1.23
SPECC1-210ENST00000492188 POTEDQ86YR6 584 aa22.54■■□□□ 1.2
SPECC1-210ENST00000492188 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
SPECC1-210ENST00000492188 PPP4R3CPQ6ZMV5 832 aa21.33■■□□□ 1.01
SPECC1-210ENST00000492188 MAPK8IP2Q13387 824 aaPredicted RBP21.28■■□□□ 1
SPECC1-210ENST00000492188 DMRT2Q9Y5R5 561 aa21.05■□□□□ 0.96
SPECC1-210ENST00000492188 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
SPECC1-210ENST00000492188 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
SPECC1-210ENST00000492188 HOXD11P31277 338 aaPredicted RBP20.5■□□□□ 0.87
SPECC1-210ENST00000492188 KCNA4P22459 653 aa20.49■□□□□ 0.87
SPECC1-210ENST00000492188 RNF216Q9NWF9 866 aaPredicted RBP20.48■□□□□ 0.87
SPECC1-210ENST00000492188 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
SPECC1-210ENST00000492188 DCAF8L1A6NGE4 600 aa20.09■□□□□ 0.81
SPECC1-210ENST00000492188 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
SPECC1-210ENST00000492188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
SPECC1-210ENST00000492188 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
SPECC1-210ENST00000492188 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
SPECC1-210ENST00000492188 SLC4A1APQ9BWU0 796 aaKnown RBP19.44■□□□□ 0.7
SPECC1-210ENST00000492188 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
SPECC1-210ENST00000492188 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
SPECC1-210ENST00000492188 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SPECC1-210ENST00000492188 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
SPECC1-210ENST00000492188 ZBTB22O15209 634 aa18.88■□□□□ 0.61
SPECC1-210ENST00000492188 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
SPECC1-210ENST00000492188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
SPECC1-210ENST00000492188 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
SPECC1-210ENST00000492188 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
SPECC1-210ENST00000492188 SPINK5Q9NQ38 1064 aaPredicted RBP18.72■□□□□ 0.59
SPECC1-210ENST00000492188 APLP2Q06481 763 aa18.66■□□□□ 0.58
SPECC1-210ENST00000492188 CAPN15O75808 1086 aa18.63■□□□□ 0.57
SPECC1-210ENST00000492188 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
SPECC1-210ENST00000492188 CSRNP3Q8WYN3 585 aa18.49■□□□□ 0.55
SPECC1-210ENST00000492188 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
SPECC1-210ENST00000492188 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
SPECC1-210ENST00000492188 DSG3P32926 999 aa18.43■□□□□ 0.54
SPECC1-210ENST00000492188 ATF5Q9Y2D1 282 aaPredicted RBP18.38■□□□□ 0.53
SPECC1-210ENST00000492188 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
SPECC1-210ENST00000492188 ABCB7O75027 752 aa18.27■□□□□ 0.52
SPECC1-210ENST00000492188 POLA2Q14181 598 aa18.12■□□□□ 0.49
SPECC1-210ENST00000492188 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
SPECC1-210ENST00000492188 FBLN2P98095 1184 aa17.59■□□□□ 0.41
SPECC1-210ENST00000492188 POTEHQ6S545 545 aa17.58■□□□□ 0.4
SPECC1-210ENST00000492188 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
SPECC1-210ENST00000492188 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
SPECC1-210ENST00000492188 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
SPECC1-210ENST00000492188 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
SPECC1-210ENST00000492188 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
SPECC1-210ENST00000492188 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
SPECC1-210ENST00000492188 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
SPECC1-210ENST00000492188 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
SPECC1-210ENST00000492188 SSUH2Q9Y2M2 353 aa17.15■□□□□ 0.34
SPECC1-210ENST00000492188 REM2Q8IYK8 340 aaPredicted RBP17.12■□□□□ 0.33
SPECC1-210ENST00000492188 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
SPECC1-210ENST00000492188 SPDYE4A6NLX3 237 aa16.99■□□□□ 0.31
SPECC1-210ENST00000492188 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
SPECC1-210ENST00000492188 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
SPECC1-210ENST00000492188 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
SPECC1-210ENST00000492188 SPDYE1Q8NFV5 336 aaPredicted RBP16.85■□□□□ 0.29
SPECC1-210ENST00000492188 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SPECC1-210ENST00000492188 PROM2Q8N271 834 aa16.72■□□□□ 0.27
SPECC1-210ENST00000492188 FKBP8Q14318 412 aa16.71■□□□□ 0.27
SPECC1-210ENST00000492188 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.26
SPECC1-210ENST00000492188 PIP4P2Q8N4L2 257 aa16.68■□□□□ 0.26
SPECC1-210ENST00000492188 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
SPECC1-210ENST00000492188 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
SPECC1-210ENST00000492188 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
SPECC1-210ENST00000492188 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
SPECC1-210ENST00000492188 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
SPECC1-210ENST00000492188 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
SPECC1-210ENST00000492188 FARP1Q9Y4F1 1045 aaPredicted RBP16.24■□□□□ 0.19
SPECC1-210ENST00000492188 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
SPECC1-210ENST00000492188 HAX1O00165 279 aa16.19■□□□□ 0.18
SPECC1-210ENST00000492188 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
SPECC1-210ENST00000492188 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
SPECC1-210ENST00000492188 MIER1Q8N108 512 aa16.13■□□□□ 0.17
SPECC1-210ENST00000492188 EVX2Q03828 476 aa16.08■□□□□ 0.16
SPECC1-210ENST00000492188 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
SPECC1-210ENST00000492188 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
SPECC1-210ENST00000492188 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
SPECC1-210ENST00000492188 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
SPECC1-210ENST00000492188 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
SPECC1-210ENST00000492188 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
SPECC1-210ENST00000492188 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
SPECC1-210ENST00000492188 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
SPECC1-210ENST00000492188 NUBP1P53384 320 aa15.79■□□□□ 0.12
SPECC1-210ENST00000492188 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
SPECC1-210ENST00000492188 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
SPECC1-210ENST00000492188 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
SPECC1-210ENST00000492188 KLHL34Q8N239 644 aa15.76■□□□□ 0.11
SPECC1-210ENST00000492188 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
SPECC1-210ENST00000492188 GABBR2O75899 941 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms