RNA–Protein interactions for RNA: ENST00000491005.5

RAB3GAP2-209, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 2

Gene RAB3GAP2, Length 897 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-209ENST00000491005 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
RAB3GAP2-209ENST00000491005 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
RAB3GAP2-209ENST00000491005 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
RAB3GAP2-209ENST00000491005 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
RAB3GAP2-209ENST00000491005 FOXD1Q16676 465 aa17.34■□□□□ 0.37
RAB3GAP2-209ENST00000491005 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
RAB3GAP2-209ENST00000491005 MSH5O43196 834 aa16.42■□□□□ 0.22
RAB3GAP2-209ENST00000491005 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
RAB3GAP2-209ENST00000491005 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
RAB3GAP2-209ENST00000491005 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
RAB3GAP2-209ENST00000491005 ADRA2BP18089 450 aa15.83■□□□□ 0.12
RAB3GAP2-209ENST00000491005 NISCHQ9Y2I1 1504 aa15.38■□□□□ 0.05
RAB3GAP2-209ENST00000491005 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
RAB3GAP2-209ENST00000491005 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
RAB3GAP2-209ENST00000491005 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
RAB3GAP2-209ENST00000491005 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
RAB3GAP2-209ENST00000491005 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
RAB3GAP2-209ENST00000491005 DCAF8L1A6NGE4 600 aa14.05□□□□□ -0.16
RAB3GAP2-209ENST00000491005 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
RAB3GAP2-209ENST00000491005 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
RAB3GAP2-209ENST00000491005 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
RAB3GAP2-209ENST00000491005 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
RAB3GAP2-209ENST00000491005 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
RAB3GAP2-209ENST00000491005 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
RAB3GAP2-209ENST00000491005 KCNA4P22459 653 aa13.7□□□□□ -0.22
RAB3GAP2-209ENST00000491005 DNAJC5BQ9UF47 199 aa13.65□□□□□ -0.22
RAB3GAP2-209ENST00000491005 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
RAB3GAP2-209ENST00000491005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
RAB3GAP2-209ENST00000491005 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
RAB3GAP2-209ENST00000491005 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
RAB3GAP2-209ENST00000491005 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
RAB3GAP2-209ENST00000491005 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RAB3GAP2-209ENST00000491005 POTEHQ6S545 545 aa12.96□□□□□ -0.33
RAB3GAP2-209ENST00000491005 DSG3P32926 999 aa12.94□□□□□ -0.34
RAB3GAP2-209ENST00000491005 CAPN15O75808 1086 aa12.9□□□□□ -0.34
RAB3GAP2-209ENST00000491005 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
RAB3GAP2-209ENST00000491005 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
RAB3GAP2-209ENST00000491005 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
RAB3GAP2-209ENST00000491005 SHROOM4Q9ULL8 1493 aa12.72□□□□□ -0.37
RAB3GAP2-209ENST00000491005 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
RAB3GAP2-209ENST00000491005 APLP2Q06481 763 aa12.65□□□□□ -0.38
RAB3GAP2-209ENST00000491005 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
RAB3GAP2-209ENST00000491005 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
RAB3GAP2-209ENST00000491005 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
RAB3GAP2-209ENST00000491005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
RAB3GAP2-209ENST00000491005 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
RAB3GAP2-209ENST00000491005 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
RAB3GAP2-209ENST00000491005 ZBTB22O15209 634 aa12.57□□□□□ -0.4
RAB3GAP2-209ENST00000491005 ABCB7O75027 752 aa12.56□□□□□ -0.4
RAB3GAP2-209ENST00000491005 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
RAB3GAP2-209ENST00000491005 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
RAB3GAP2-209ENST00000491005 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
RAB3GAP2-209ENST00000491005 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
RAB3GAP2-209ENST00000491005 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
RAB3GAP2-209ENST00000491005 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
RAB3GAP2-209ENST00000491005 ABCC9O60706 1549 aa12.32□□□□□ -0.44
RAB3GAP2-209ENST00000491005 NACADO15069 1562 aa12.28□□□□□ -0.44
RAB3GAP2-209ENST00000491005 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
RAB3GAP2-209ENST00000491005 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
RAB3GAP2-209ENST00000491005 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
RAB3GAP2-209ENST00000491005 POLA2Q14181 598 aa12.19□□□□□ -0.46
RAB3GAP2-209ENST00000491005 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
RAB3GAP2-209ENST00000491005 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
RAB3GAP2-209ENST00000491005 HRCP23327 699 aa12.07□□□□□ -0.48
RAB3GAP2-209ENST00000491005 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
RAB3GAP2-209ENST00000491005 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
RAB3GAP2-209ENST00000491005 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
RAB3GAP2-209ENST00000491005 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
RAB3GAP2-209ENST00000491005 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
RAB3GAP2-209ENST00000491005 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
RAB3GAP2-209ENST00000491005 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
RAB3GAP2-209ENST00000491005 BAZ1AQ9NRL2 1556 aaPredicted RBP11.94□□□□□ -0.5
RAB3GAP2-209ENST00000491005 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
RAB3GAP2-209ENST00000491005 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
RAB3GAP2-209ENST00000491005 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
RAB3GAP2-209ENST00000491005 FBLN2P98095 1184 aa11.81□□□□□ -0.52
RAB3GAP2-209ENST00000491005 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
RAB3GAP2-209ENST00000491005 MROH2BQ7Z745 1585 aa11.79□□□□□ -0.52
RAB3GAP2-209ENST00000491005 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
RAB3GAP2-209ENST00000491005 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
RAB3GAP2-209ENST00000491005 EEA1Q15075 1411 aa11.75□□□□□ -0.53
RAB3GAP2-209ENST00000491005 HAX1O00165 279 aa11.74□□□□□ -0.53
RAB3GAP2-209ENST00000491005 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
RAB3GAP2-209ENST00000491005 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB3GAP2-209ENST00000491005 CECR2Q9BXF3 1484 aa11.73□□□□□ -0.53
RAB3GAP2-209ENST00000491005 WIZO95785 1651 aa11.72□□□□□ -0.53
RAB3GAP2-209ENST00000491005 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
RAB3GAP2-209ENST00000491005 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
RAB3GAP2-209ENST00000491005 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
RAB3GAP2-209ENST00000491005 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
RAB3GAP2-209ENST00000491005 UNC13AQ9UPW8 1703 aa11.6□□□□□ -0.55
RAB3GAP2-209ENST00000491005 SMARCA2P51531 1590 aa11.58□□□□□ -0.55
RAB3GAP2-209ENST00000491005 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
RAB3GAP2-209ENST00000491005 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
RAB3GAP2-209ENST00000491005 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
RAB3GAP2-209ENST00000491005 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
RAB3GAP2-209ENST00000491005 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
RAB3GAP2-209ENST00000491005 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
RAB3GAP2-209ENST00000491005 EVX2Q03828 476 aa11.54□□□□□ -0.56
RAB3GAP2-209ENST00000491005 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms