RNA–Protein interactions for RNA: ENST00000490547.2

PATJ-210, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-210ENST00000490547 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
PATJ-210ENST00000490547 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
PATJ-210ENST00000490547 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
PATJ-210ENST00000490547 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
PATJ-210ENST00000490547 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
PATJ-210ENST00000490547 FOXD1Q16676 465 aa18.56■□□□□ 0.56
PATJ-210ENST00000490547 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
PATJ-210ENST00000490547 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
PATJ-210ENST00000490547 ADRA2BP18089 450 aa17.91■□□□□ 0.46
PATJ-210ENST00000490547 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
PATJ-210ENST00000490547 MSH5O43196 834 aa17.06■□□□□ 0.32
PATJ-210ENST00000490547 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
PATJ-210ENST00000490547 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
PATJ-210ENST00000490547 KCNA4P22459 653 aa16.3■□□□□ 0.2
PATJ-210ENST00000490547 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PATJ-210ENST00000490547 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
PATJ-210ENST00000490547 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
PATJ-210ENST00000490547 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
PATJ-210ENST00000490547 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
PATJ-210ENST00000490547 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
PATJ-210ENST00000490547 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
PATJ-210ENST00000490547 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
PATJ-210ENST00000490547 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
PATJ-210ENST00000490547 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
PATJ-210ENST00000490547 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
PATJ-210ENST00000490547 SLC4A2P04920 1241 aa15.06■□□□□ 0
PATJ-210ENST00000490547 ZBTB22O15209 634 aa15.02■□□□□ -0
PATJ-210ENST00000490547 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
PATJ-210ENST00000490547 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
PATJ-210ENST00000490547 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
PATJ-210ENST00000490547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.027e-6■□□□□ 10.8
PATJ-210ENST00000490547 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
PATJ-210ENST00000490547 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
PATJ-210ENST00000490547 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
PATJ-210ENST00000490547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
PATJ-210ENST00000490547 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
PATJ-210ENST00000490547 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
PATJ-210ENST00000490547 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
PATJ-210ENST00000490547 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
PATJ-210ENST00000490547 APLP2Q06481 763 aa14.34□□□□□ -0.11
PATJ-210ENST00000490547 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
PATJ-210ENST00000490547 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
PATJ-210ENST00000490547 CAPN15O75808 1086 aa14.17□□□□□ -0.14
PATJ-210ENST00000490547 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
PATJ-210ENST00000490547 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
PATJ-210ENST00000490547 POTEHQ6S545 545 aa14.03□□□□□ -0.16
PATJ-210ENST00000490547 DSG3P32926 999 aa13.97□□□□□ -0.17
PATJ-210ENST00000490547 POLA2Q14181 598 aa13.94□□□□□ -0.18
PATJ-210ENST00000490547 ABCB7O75027 752 aa13.91□□□□□ -0.18
PATJ-210ENST00000490547 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
PATJ-210ENST00000490547 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
PATJ-210ENST00000490547 FBLN2P98095 1184 aa13.68□□□□□ -0.22
PATJ-210ENST00000490547 FKBP8Q14318 412 aa13.51□□□□□ -0.25
PATJ-210ENST00000490547 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
PATJ-210ENST00000490547 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
PATJ-210ENST00000490547 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
PATJ-210ENST00000490547 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
PATJ-210ENST00000490547 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
PATJ-210ENST00000490547 NISCHQ9Y2I1 1504 aa13.31□□□□□ -0.28
PATJ-210ENST00000490547 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
PATJ-210ENST00000490547 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
PATJ-210ENST00000490547 PROM2Q8N271 834 aa13.28□□□□□ -0.28
PATJ-210ENST00000490547 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
PATJ-210ENST00000490547 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
PATJ-210ENST00000490547 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
PATJ-210ENST00000490547 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
PATJ-210ENST00000490547 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
PATJ-210ENST00000490547 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
PATJ-210ENST00000490547 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
PATJ-210ENST00000490547 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
PATJ-210ENST00000490547 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
PATJ-210ENST00000490547 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
PATJ-210ENST00000490547 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
PATJ-210ENST00000490547 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
PATJ-210ENST00000490547 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
PATJ-210ENST00000490547 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
PATJ-210ENST00000490547 MIER1Q8N108 512 aa12.71□□□□□ -0.37
PATJ-210ENST00000490547 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
PATJ-210ENST00000490547 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
PATJ-210ENST00000490547 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
PATJ-210ENST00000490547 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
PATJ-210ENST00000490547 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■□□ 14.6
PATJ-210ENST00000490547 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
PATJ-210ENST00000490547 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
PATJ-210ENST00000490547 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
PATJ-210ENST00000490547 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
PATJ-210ENST00000490547 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
PATJ-210ENST00000490547 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PATJ-210ENST00000490547 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
PATJ-210ENST00000490547 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
PATJ-210ENST00000490547 SPOCK2Q92563 424 aa12.5□□□□□ -0.41
PATJ-210ENST00000490547 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
PATJ-210ENST00000490547 NUBP1P53384 320 aa12.42□□□□□ -0.42
PATJ-210ENST00000490547 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
PATJ-210ENST00000490547 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
PATJ-210ENST00000490547 PKD2Q13563 968 aa12.31□□□□□ -0.44
PATJ-210ENST00000490547 GSE1Q14687 1217 aa12.27□□□□□ -0.45
PATJ-210ENST00000490547 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
PATJ-210ENST00000490547 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
PATJ-210ENST00000490547 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms