RNA–Protein interactions for RNA: ENST00000489910.1

LGR4-204, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 3

Gene LGR4, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-204ENST00000489910 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
LGR4-204ENST00000489910 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
LGR4-204ENST00000489910 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
LGR4-204ENST00000489910 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
LGR4-204ENST00000489910 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
LGR4-204ENST00000489910 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
LGR4-204ENST00000489910 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
LGR4-204ENST00000489910 KCNA4P22459 653 aa14.71□□□□□ -0.05
LGR4-204ENST00000489910 ADRA2BP18089 450 aa14.63□□□□□ -0.07
LGR4-204ENST00000489910 FOXD1Q16676 465 aa14.55□□□□□ -0.08
LGR4-204ENST00000489910 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
LGR4-204ENST00000489910 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
LGR4-204ENST00000489910 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
LGR4-204ENST00000489910 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
LGR4-204ENST00000489910 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
LGR4-204ENST00000489910 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
LGR4-204ENST00000489910 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
LGR4-204ENST00000489910 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
LGR4-204ENST00000489910 ZBTB22O15209 634 aa13.57□□□□□ -0.24
LGR4-204ENST00000489910 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
LGR4-204ENST00000489910 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
LGR4-204ENST00000489910 MSH5O43196 834 aa13.33□□□□□ -0.28
LGR4-204ENST00000489910 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
LGR4-204ENST00000489910 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
LGR4-204ENST00000489910 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
LGR4-204ENST00000489910 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
LGR4-204ENST00000489910 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
LGR4-204ENST00000489910 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
LGR4-204ENST00000489910 FKBP8Q14318 412 aa12.84□□□□□ -0.35
LGR4-204ENST00000489910 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
LGR4-204ENST00000489910 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
LGR4-204ENST00000489910 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
LGR4-204ENST00000489910 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
LGR4-204ENST00000489910 DMRT2Q9Y5R5 561 aa12.58□□□□□ -0.4
LGR4-204ENST00000489910 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
LGR4-204ENST00000489910 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
LGR4-204ENST00000489910 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
LGR4-204ENST00000489910 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
LGR4-204ENST00000489910 ABCC9O60706 1549 aa12.33□□□□□ -0.44
LGR4-204ENST00000489910 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
LGR4-204ENST00000489910 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
LGR4-204ENST00000489910 NACADO15069 1562 aa12.22□□□□□ -0.45
LGR4-204ENST00000489910 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
LGR4-204ENST00000489910 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
LGR4-204ENST00000489910 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
LGR4-204ENST00000489910 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
LGR4-204ENST00000489910 BCANQ96GW7 911 aa12.16□□□□□ -0.46
LGR4-204ENST00000489910 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.46
LGR4-204ENST00000489910 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
LGR4-204ENST00000489910 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
LGR4-204ENST00000489910 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
LGR4-204ENST00000489910 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
LGR4-204ENST00000489910 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
LGR4-204ENST00000489910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
LGR4-204ENST00000489910 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
LGR4-204ENST00000489910 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
LGR4-204ENST00000489910 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
LGR4-204ENST00000489910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
LGR4-204ENST00000489910 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
LGR4-204ENST00000489910 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
LGR4-204ENST00000489910 PKD2Q13563 968 aa11.84□□□□□ -0.51
LGR4-204ENST00000489910 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
LGR4-204ENST00000489910 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
LGR4-204ENST00000489910 PROM2Q8N271 834 aa11.81□□□□□ -0.52
LGR4-204ENST00000489910 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
LGR4-204ENST00000489910 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
LGR4-204ENST00000489910 SHROOM4Q9ULL8 1493 aa11.77□□□□□ -0.52
LGR4-204ENST00000489910 FBLN2P98095 1184 aa11.75□□□□□ -0.53
LGR4-204ENST00000489910 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.73□□□□□ -0.53
LGR4-204ENST00000489910 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
LGR4-204ENST00000489910 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
LGR4-204ENST00000489910 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
LGR4-204ENST00000489910 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
LGR4-204ENST00000489910 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
LGR4-204ENST00000489910 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
LGR4-204ENST00000489910 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
LGR4-204ENST00000489910 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
LGR4-204ENST00000489910 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
LGR4-204ENST00000489910 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
LGR4-204ENST00000489910 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
LGR4-204ENST00000489910 APLP2Q06481 763 aa11.51□□□□□ -0.57
LGR4-204ENST00000489910 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
LGR4-204ENST00000489910 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
LGR4-204ENST00000489910 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
LGR4-204ENST00000489910 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
LGR4-204ENST00000489910 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
LGR4-204ENST00000489910 RGL2O15211 777 aa11.45□□□□□ -0.58
LGR4-204ENST00000489910 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
LGR4-204ENST00000489910 NBR1Q14596 966 aa11.4□□□□□ -0.58
LGR4-204ENST00000489910 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
LGR4-204ENST00000489910 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
LGR4-204ENST00000489910 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
LGR4-204ENST00000489910 ARXQ96QS3 562 aa11.36□□□□□ -0.59
LGR4-204ENST00000489910 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
LGR4-204ENST00000489910 CECR2Q9BXF3 1484 aa11.35□□□□□ -0.59
LGR4-204ENST00000489910 EIF4G1Q04637 1599 aaKnown RBP11.35□□□□□ -0.59
LGR4-204ENST00000489910 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
LGR4-204ENST00000489910 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
LGR4-204ENST00000489910 CHGAP10645 457 aaKnown RBP11.31□□□□□ -0.6
LGR4-204ENST00000489910 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms