RNA–Protein interactions for RNA: ENST00000488850.1

CROT-207, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 2

Gene CROT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-207ENST00000488850 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
CROT-207ENST00000488850 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
CROT-207ENST00000488850 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
CROT-207ENST00000488850 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
CROT-207ENST00000488850 FOXD1Q16676 465 aa20.29■□□□□ 0.84
CROT-207ENST00000488850 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
CROT-207ENST00000488850 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
CROT-207ENST00000488850 ADRA2BP18089 450 aa19.21■□□□□ 0.67
CROT-207ENST00000488850 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
CROT-207ENST00000488850 MSH5O43196 834 aa18.89■□□□□ 0.61
CROT-207ENST00000488850 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
CROT-207ENST00000488850 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
CROT-207ENST00000488850 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
CROT-207ENST00000488850 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
CROT-207ENST00000488850 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
CROT-207ENST00000488850 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
CROT-207ENST00000488850 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
CROT-207ENST00000488850 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
CROT-207ENST00000488850 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
CROT-207ENST00000488850 KCNA4P22459 653 aa16.73■□□□□ 0.27
CROT-207ENST00000488850 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CROT-207ENST00000488850 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
CROT-207ENST00000488850 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
CROT-207ENST00000488850 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
CROT-207ENST00000488850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
CROT-207ENST00000488850 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
CROT-207ENST00000488850 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
CROT-207ENST00000488850 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
CROT-207ENST00000488850 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
CROT-207ENST00000488850 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
CROT-207ENST00000488850 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
CROT-207ENST00000488850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
CROT-207ENST00000488850 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
CROT-207ENST00000488850 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
CROT-207ENST00000488850 APLP2Q06481 763 aa15.45■□□□□ 0.06
CROT-207ENST00000488850 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
CROT-207ENST00000488850 CAPN15O75808 1086 aa15.43■□□□□ 0.06
CROT-207ENST00000488850 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
CROT-207ENST00000488850 ZBTB22O15209 634 aa15.38■□□□□ 0.05
CROT-207ENST00000488850 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
CROT-207ENST00000488850 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
CROT-207ENST00000488850 DSG3P32926 999 aa15.23■□□□□ 0.03
CROT-207ENST00000488850 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
CROT-207ENST00000488850 ABCB7O75027 752 aa15.1■□□□□ 0.01
CROT-207ENST00000488850 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
CROT-207ENST00000488850 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
CROT-207ENST00000488850 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
CROT-207ENST00000488850 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
CROT-207ENST00000488850 POLA2Q14181 598 aa14.93□□□□□ -0.02
CROT-207ENST00000488850 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
CROT-207ENST00000488850 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
CROT-207ENST00000488850 FBLN2P98095 1184 aa14.49□□□□□ -0.09
CROT-207ENST00000488850 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
CROT-207ENST00000488850 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
CROT-207ENST00000488850 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
CROT-207ENST00000488850 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
CROT-207ENST00000488850 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
CROT-207ENST00000488850 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
CROT-207ENST00000488850 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
CROT-207ENST00000488850 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
CROT-207ENST00000488850 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
CROT-207ENST00000488850 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
CROT-207ENST00000488850 POTEHQ6S545 545 aa14.01□□□□□ -0.17
CROT-207ENST00000488850 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
CROT-207ENST00000488850 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
CROT-207ENST00000488850 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
CROT-207ENST00000488850 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
CROT-207ENST00000488850 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
CROT-207ENST00000488850 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
CROT-207ENST00000488850 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
CROT-207ENST00000488850 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
CROT-207ENST00000488850 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
CROT-207ENST00000488850 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
CROT-207ENST00000488850 PROM2Q8N271 834 aa13.63□□□□□ -0.23
CROT-207ENST00000488850 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CROT-207ENST00000488850 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
CROT-207ENST00000488850 HAX1O00165 279 aa13.46□□□□□ -0.25
CROT-207ENST00000488850 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
CROT-207ENST00000488850 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
CROT-207ENST00000488850 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
CROT-207ENST00000488850 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
CROT-207ENST00000488850 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
CROT-207ENST00000488850 EVX2Q03828 476 aa13.27□□□□□ -0.29
CROT-207ENST00000488850 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
CROT-207ENST00000488850 MIER1Q8N108 512 aa13.24□□□□□ -0.29
CROT-207ENST00000488850 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
CROT-207ENST00000488850 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
CROT-207ENST00000488850 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
CROT-207ENST00000488850 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
CROT-207ENST00000488850 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
CROT-207ENST00000488850 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
CROT-207ENST00000488850 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
CROT-207ENST00000488850 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
CROT-207ENST00000488850 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
CROT-207ENST00000488850 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
CROT-207ENST00000488850 GABBR2O75899 941 aa13.03□□□□□ -0.32
CROT-207ENST00000488850 CLCN6P51797 869 aa12.98□□□□□ -0.33
CROT-207ENST00000488850 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
CROT-207ENST00000488850 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
CROT-207ENST00000488850 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms