RNA–Protein interactions for RNA: ENST00000488346.5

PRUNE2-212, Transcript of prune homolog 2, humanhuman

TSL 2

Gene PRUNE2, Length 791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-212ENST00000488346 AEBP2Q6ZN18 517 aaPredicted RBP31.93■■■□□ 2.7
PRUNE2-212ENST00000488346 CHIC1Q5VXU3 224 aa30.82■■■□□ 2.52
PRUNE2-212ENST00000488346 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
PRUNE2-212ENST00000488346 PHF23Q9BUL5 403 aaPredicted RBP27.04■■□□□ 1.92
PRUNE2-212ENST00000488346 FOXD1Q16676 465 aa25.26■■□□□ 1.63
PRUNE2-212ENST00000488346 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
PRUNE2-212ENST00000488346 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
PRUNE2-212ENST00000488346 ADRA2BP18089 450 aa23.92■■□□□ 1.42
PRUNE2-212ENST00000488346 PIAS4Q8N2W9 510 aaPredicted RBP23.71■■□□□ 1.39
PRUNE2-212ENST00000488346 MSH5O43196 834 aa23.49■■□□□ 1.35
PRUNE2-212ENST00000488346 POTEDQ86YR6 584 aa22.06■■□□□ 1.12
PRUNE2-212ENST00000488346 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
PRUNE2-212ENST00000488346 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
PRUNE2-212ENST00000488346 MAPK8IP2Q13387 824 aaPredicted RBP21.82■■□□□ 1.08
PRUNE2-212ENST00000488346 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
PRUNE2-212ENST00000488346 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
PRUNE2-212ENST00000488346 NCBP3Q53F19 620 aaKnown RBP21.17■□□□□ 0.98
PRUNE2-212ENST00000488346 HOXD11P31277 338 aaPredicted RBP21.06■□□□□ 0.96
PRUNE2-212ENST00000488346 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
PRUNE2-212ENST00000488346 KCNA4P22459 653 aa20.84■□□□□ 0.93
PRUNE2-212ENST00000488346 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
PRUNE2-212ENST00000488346 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
PRUNE2-212ENST00000488346 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
PRUNE2-212ENST00000488346 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
PRUNE2-212ENST00000488346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
PRUNE2-212ENST00000488346 C1QBPQ07021 282 aaKnown RBP19.84■□□□□ 0.77
PRUNE2-212ENST00000488346 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
PRUNE2-212ENST00000488346 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
PRUNE2-212ENST00000488346 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
PRUNE2-212ENST00000488346 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
PRUNE2-212ENST00000488346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
PRUNE2-212ENST00000488346 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
PRUNE2-212ENST00000488346 FOXD4L1Q9NU39 408 aa19.32■□□□□ 0.68
PRUNE2-212ENST00000488346 MYCNP04198 464 aaPredicted RBP19.26■□□□□ 0.67
PRUNE2-212ENST00000488346 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
PRUNE2-212ENST00000488346 APLP2Q06481 763 aa19.21■□□□□ 0.67
PRUNE2-212ENST00000488346 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
PRUNE2-212ENST00000488346 ZBTB22O15209 634 aa19.17■□□□□ 0.66
PRUNE2-212ENST00000488346 CAPN15O75808 1086 aa19.14■□□□□ 0.65
PRUNE2-212ENST00000488346 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
PRUNE2-212ENST00000488346 DSG3P32926 999 aa18.96■□□□□ 0.63
PRUNE2-212ENST00000488346 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
PRUNE2-212ENST00000488346 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
PRUNE2-212ENST00000488346 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
PRUNE2-212ENST00000488346 ATXN8OSP0DMR3 200 aa18.74■□□□□ 0.59
PRUNE2-212ENST00000488346 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
PRUNE2-212ENST00000488346 ABCB7O75027 752 aa18.72■□□□□ 0.59
PRUNE2-212ENST00000488346 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
PRUNE2-212ENST00000488346 POLA2Q14181 598 aa18.58■□□□□ 0.56
PRUNE2-212ENST00000488346 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
PRUNE2-212ENST00000488346 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
PRUNE2-212ENST00000488346 FBLN2P98095 1184 aa18.02■□□□□ 0.48
PRUNE2-212ENST00000488346 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
PRUNE2-212ENST00000488346 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
PRUNE2-212ENST00000488346 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
PRUNE2-212ENST00000488346 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
PRUNE2-212ENST00000488346 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
PRUNE2-212ENST00000488346 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
PRUNE2-212ENST00000488346 REM2Q8IYK8 340 aaPredicted RBP17.6■□□□□ 0.41
PRUNE2-212ENST00000488346 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
PRUNE2-212ENST00000488346 SSUH2Q9Y2M2 353 aa17.57■□□□□ 0.4
PRUNE2-212ENST00000488346 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
PRUNE2-212ENST00000488346 POTEHQ6S545 545 aa17.39■□□□□ 0.37
PRUNE2-212ENST00000488346 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
PRUNE2-212ENST00000488346 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRUNE2-212ENST00000488346 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
PRUNE2-212ENST00000488346 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
PRUNE2-212ENST00000488346 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
PRUNE2-212ENST00000488346 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRUNE2-212ENST00000488346 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
PRUNE2-212ENST00000488346 PROM2Q8N271 834 aa17.04■□□□□ 0.32
PRUNE2-212ENST00000488346 PRR29P0C7W0 189 aa17.03■□□□□ 0.32
PRUNE2-212ENST00000488346 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
PRUNE2-212ENST00000488346 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
PRUNE2-212ENST00000488346 FKBP8Q14318 412 aa16.94■□□□□ 0.3
PRUNE2-212ENST00000488346 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
PRUNE2-212ENST00000488346 HAX1O00165 279 aa16.72■□□□□ 0.27
PRUNE2-212ENST00000488346 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
PRUNE2-212ENST00000488346 FARP1Q9Y4F1 1045 aaPredicted RBP16.67■□□□□ 0.26
PRUNE2-212ENST00000488346 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
PRUNE2-212ENST00000488346 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
PRUNE2-212ENST00000488346 EVX2Q03828 476 aa16.53■□□□□ 0.24
PRUNE2-212ENST00000488346 MNX1P50219 401 aaPredicted RBP16.52■□□□□ 0.24
PRUNE2-212ENST00000488346 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
PRUNE2-212ENST00000488346 MIER1Q8N108 512 aa16.48■□□□□ 0.23
PRUNE2-212ENST00000488346 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRUNE2-212ENST00000488346 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
PRUNE2-212ENST00000488346 CD44P16070 742 aaKnown RBP16.43■□□□□ 0.22
PRUNE2-212ENST00000488346 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
PRUNE2-212ENST00000488346 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
PRUNE2-212ENST00000488346 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
PRUNE2-212ENST00000488346 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
PRUNE2-212ENST00000488346 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
PRUNE2-212ENST00000488346 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
PRUNE2-212ENST00000488346 ZNF579Q8NAF0 562 aaKnown RBP16.23■□□□□ 0.19
PRUNE2-212ENST00000488346 CLCN6P51797 869 aa16.22■□□□□ 0.19
PRUNE2-212ENST00000488346 GABBR2O75899 941 aa16.21■□□□□ 0.19
PRUNE2-212ENST00000488346 NUBP1P53384 320 aa16.12■□□□□ 0.17
PRUNE2-212ENST00000488346 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
PRUNE2-212ENST00000488346 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms