RNA–Protein interactions for RNA: ENST00000488027.5

C1orf87-204, Transcript of chromosome 1 open reading frame 87, humanhuman

TSL 1 (best)

Gene C1orf87, Length 858 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf87-204ENST00000488027 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
C1orf87-204ENST00000488027 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
C1orf87-204ENST00000488027 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
C1orf87-204ENST00000488027 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
C1orf87-204ENST00000488027 FOXD1Q16676 465 aa17.93■□□□□ 0.46
C1orf87-204ENST00000488027 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
C1orf87-204ENST00000488027 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
C1orf87-204ENST00000488027 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
C1orf87-204ENST00000488027 MSH5O43196 834 aa16.78■□□□□ 0.28
C1orf87-204ENST00000488027 ADRA2BP18089 450 aa16.78■□□□□ 0.28
C1orf87-204ENST00000488027 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
C1orf87-204ENST00000488027 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
C1orf87-204ENST00000488027 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
C1orf87-204ENST00000488027 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
C1orf87-204ENST00000488027 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
C1orf87-204ENST00000488027 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
C1orf87-204ENST00000488027 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
C1orf87-204ENST00000488027 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
C1orf87-204ENST00000488027 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
C1orf87-204ENST00000488027 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
C1orf87-204ENST00000488027 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
C1orf87-204ENST00000488027 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
C1orf87-204ENST00000488027 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
C1orf87-204ENST00000488027 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
C1orf87-204ENST00000488027 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
C1orf87-204ENST00000488027 KCNA4P22459 653 aa14.17□□□□□ -0.14
C1orf87-204ENST00000488027 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
C1orf87-204ENST00000488027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
C1orf87-204ENST00000488027 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
C1orf87-204ENST00000488027 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
C1orf87-204ENST00000488027 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
C1orf87-204ENST00000488027 CAPN15O75808 1086 aa13.52□□□□□ -0.25
C1orf87-204ENST00000488027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
C1orf87-204ENST00000488027 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
C1orf87-204ENST00000488027 APLP2Q06481 763 aa13.46□□□□□ -0.25
C1orf87-204ENST00000488027 DSG3P32926 999 aa13.42□□□□□ -0.26
C1orf87-204ENST00000488027 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
C1orf87-204ENST00000488027 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
C1orf87-204ENST00000488027 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
C1orf87-204ENST00000488027 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
C1orf87-204ENST00000488027 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
C1orf87-204ENST00000488027 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
C1orf87-204ENST00000488027 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
C1orf87-204ENST00000488027 ABCB7O75027 752 aa13.2□□□□□ -0.3
C1orf87-204ENST00000488027 ZBTB22O15209 634 aa13.03□□□□□ -0.32
C1orf87-204ENST00000488027 POLA2Q14181 598 aa12.99□□□□□ -0.33
C1orf87-204ENST00000488027 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
C1orf87-204ENST00000488027 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
C1orf87-204ENST00000488027 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
C1orf87-204ENST00000488027 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
C1orf87-204ENST00000488027 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
C1orf87-204ENST00000488027 POTEHQ6S545 545 aa12.7□□□□□ -0.38
C1orf87-204ENST00000488027 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
C1orf87-204ENST00000488027 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
C1orf87-204ENST00000488027 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
C1orf87-204ENST00000488027 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
C1orf87-204ENST00000488027 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
C1orf87-204ENST00000488027 ABCC9O60706 1549 aa12.53□□□□□ -0.4
C1orf87-204ENST00000488027 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
C1orf87-204ENST00000488027 FBLN2P98095 1184 aa12.5□□□□□ -0.41
C1orf87-204ENST00000488027 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
C1orf87-204ENST00000488027 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.42
C1orf87-204ENST00000488027 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
C1orf87-204ENST00000488027 NACADO15069 1562 aa12.4□□□□□ -0.42
C1orf87-204ENST00000488027 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
C1orf87-204ENST00000488027 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
C1orf87-204ENST00000488027 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
C1orf87-204ENST00000488027 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
C1orf87-204ENST00000488027 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
C1orf87-204ENST00000488027 SCRIBQ14160 1630 aa12.32□□□□□ -0.44
C1orf87-204ENST00000488027 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
C1orf87-204ENST00000488027 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
C1orf87-204ENST00000488027 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
C1orf87-204ENST00000488027 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
C1orf87-204ENST00000488027 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
C1orf87-204ENST00000488027 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
C1orf87-204ENST00000488027 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
C1orf87-204ENST00000488027 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
C1orf87-204ENST00000488027 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.47
C1orf87-204ENST00000488027 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
C1orf87-204ENST00000488027 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
C1orf87-204ENST00000488027 HAX1O00165 279 aa11.96□□□□□ -0.49
C1orf87-204ENST00000488027 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
C1orf87-204ENST00000488027 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
C1orf87-204ENST00000488027 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
C1orf87-204ENST00000488027 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
C1orf87-204ENST00000488027 CECR2Q9BXF3 1484 aa11.89□□□□□ -0.51
C1orf87-204ENST00000488027 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
C1orf87-204ENST00000488027 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
C1orf87-204ENST00000488027 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
C1orf87-204ENST00000488027 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
C1orf87-204ENST00000488027 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
C1orf87-204ENST00000488027 EVX2Q03828 476 aa11.79□□□□□ -0.52
C1orf87-204ENST00000488027 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
C1orf87-204ENST00000488027 WIZO95785 1651 aa11.78□□□□□ -0.52
C1orf87-204ENST00000488027 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
C1orf87-204ENST00000488027 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
C1orf87-204ENST00000488027 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
C1orf87-204ENST00000488027 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
C1orf87-204ENST00000488027 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms