RNA–Protein interactions for RNA: ENST00000484507.6

KCNMA1-222, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-222ENST00000484507 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
KCNMA1-222ENST00000484507 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
KCNMA1-222ENST00000484507 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
KCNMA1-222ENST00000484507 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
KCNMA1-222ENST00000484507 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
KCNMA1-222ENST00000484507 FOXD1Q16676 465 aa19.55■□□□□ 0.72
KCNMA1-222ENST00000484507 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
KCNMA1-222ENST00000484507 ADRA2BP18089 450 aa19.29■□□□□ 0.68
KCNMA1-222ENST00000484507 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
KCNMA1-222ENST00000484507 KCNA4P22459 653 aa18.47■□□□□ 0.55
KCNMA1-222ENST00000484507 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
KCNMA1-222ENST00000484507 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
KCNMA1-222ENST00000484507 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
KCNMA1-222ENST00000484507 MSH5O43196 834 aa17.72■□□□□ 0.43
KCNMA1-222ENST00000484507 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-222ENST00000484507 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
KCNMA1-222ENST00000484507 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
KCNMA1-222ENST00000484507 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
KCNMA1-222ENST00000484507 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
KCNMA1-222ENST00000484507 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
KCNMA1-222ENST00000484507 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
KCNMA1-222ENST00000484507 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-222ENST00000484507 ZBTB22O15209 634 aa17.07■□□□□ 0.32
KCNMA1-222ENST00000484507 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
KCNMA1-222ENST00000484507 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
KCNMA1-222ENST00000484507 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
KCNMA1-222ENST00000484507 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
KCNMA1-222ENST00000484507 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
KCNMA1-222ENST00000484507 ATXN8OSP0DMR3 200 aa16.21■□□□□ 0.19
KCNMA1-222ENST00000484507 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
KCNMA1-222ENST00000484507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
KCNMA1-222ENST00000484507 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
KCNMA1-222ENST00000484507 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
KCNMA1-222ENST00000484507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
KCNMA1-222ENST00000484507 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
KCNMA1-222ENST00000484507 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
KCNMA1-222ENST00000484507 FKBP8Q14318 412 aa15.62■□□□□ 0.09
KCNMA1-222ENST00000484507 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
KCNMA1-222ENST00000484507 APLP2Q06481 763 aa15.44■□□□□ 0.06
KCNMA1-222ENST00000484507 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
KCNMA1-222ENST00000484507 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
KCNMA1-222ENST00000484507 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
KCNMA1-222ENST00000484507 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
KCNMA1-222ENST00000484507 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
KCNMA1-222ENST00000484507 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
KCNMA1-222ENST00000484507 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
KCNMA1-222ENST00000484507 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
KCNMA1-222ENST00000484507 POLA2Q14181 598 aa15.07■□□□□ 0
KCNMA1-222ENST00000484507 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
KCNMA1-222ENST00000484507 PROM2Q8N271 834 aa15.06■□□□□ 0
KCNMA1-222ENST00000484507 CAPN15O75808 1086 aa15.03■□□□□ -0
KCNMA1-222ENST00000484507 FBLN2P98095 1184 aa15□□□□□ -0.01
KCNMA1-222ENST00000484507 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
KCNMA1-222ENST00000484507 ABCB7O75027 752 aa14.83□□□□□ -0.04
KCNMA1-222ENST00000484507 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
KCNMA1-222ENST00000484507 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
KCNMA1-222ENST00000484507 DSG3P32926 999 aa14.76□□□□□ -0.05
KCNMA1-222ENST00000484507 NISCHQ9Y2I1 1504 aa14.72□□□□□ -0.05
KCNMA1-222ENST00000484507 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
KCNMA1-222ENST00000484507 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
KCNMA1-222ENST00000484507 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
KCNMA1-222ENST00000484507 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
KCNMA1-222ENST00000484507 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
KCNMA1-222ENST00000484507 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
KCNMA1-222ENST00000484507 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
KCNMA1-222ENST00000484507 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
KCNMA1-222ENST00000484507 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
KCNMA1-222ENST00000484507 PKD2Q13563 968 aa14.38□□□□□ -0.11
KCNMA1-222ENST00000484507 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
KCNMA1-222ENST00000484507 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
KCNMA1-222ENST00000484507 SPOCK2Q92563 424 aa14.27□□□□□ -0.13
KCNMA1-222ENST00000484507 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
KCNMA1-222ENST00000484507 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
KCNMA1-222ENST00000484507 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
KCNMA1-222ENST00000484507 MIER1Q8N108 512 aa14.16□□□□□ -0.14
KCNMA1-222ENST00000484507 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
KCNMA1-222ENST00000484507 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
KCNMA1-222ENST00000484507 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
KCNMA1-222ENST00000484507 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
KCNMA1-222ENST00000484507 RGL2O15211 777 aa13.97□□□□□ -0.17
KCNMA1-222ENST00000484507 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
KCNMA1-222ENST00000484507 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
KCNMA1-222ENST00000484507 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
KCNMA1-222ENST00000484507 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
KCNMA1-222ENST00000484507 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
KCNMA1-222ENST00000484507 NUBP1P53384 320 aa13.87□□□□□ -0.19
KCNMA1-222ENST00000484507 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
KCNMA1-222ENST00000484507 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
KCNMA1-222ENST00000484507 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
KCNMA1-222ENST00000484507 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
KCNMA1-222ENST00000484507 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
KCNMA1-222ENST00000484507 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
KCNMA1-222ENST00000484507 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-222ENST00000484507 GSE1Q14687 1217 aa13.78□□□□□ -0.2
KCNMA1-222ENST00000484507 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
KCNMA1-222ENST00000484507 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
KCNMA1-222ENST00000484507 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
KCNMA1-222ENST00000484507 RNF25Q96BH1 459 aaPredicted RBP13.74□□□□□ -0.21
KCNMA1-222ENST00000484507 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
KCNMA1-222ENST00000484507 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms