RNA–Protein interactions for RNA: ENST00000481468.1

GFM1-209, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 3

Gene GFM1, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-209ENST00000481468 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
GFM1-209ENST00000481468 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
GFM1-209ENST00000481468 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
GFM1-209ENST00000481468 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
GFM1-209ENST00000481468 POTEDQ86YR6 584 aa19.66■□□□□ 0.74
GFM1-209ENST00000481468 FOXD1Q16676 465 aa19.04■□□□□ 0.64
GFM1-209ENST00000481468 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
GFM1-209ENST00000481468 MSH5O43196 834 aa18.03■□□□□ 0.48
GFM1-209ENST00000481468 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
GFM1-209ENST00000481468 ADRA2BP18089 450 aa17.8■□□□□ 0.44
GFM1-209ENST00000481468 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
GFM1-209ENST00000481468 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
GFM1-209ENST00000481468 CACNB1Q02641 598 aaPredicted RBP16.2■□□□□ 0.18
GFM1-209ENST00000481468 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
GFM1-209ENST00000481468 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
GFM1-209ENST00000481468 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
GFM1-209ENST00000481468 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
GFM1-209ENST00000481468 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
GFM1-209ENST00000481468 KCNA4P22459 653 aa15.43■□□□□ 0.06
GFM1-209ENST00000481468 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
GFM1-209ENST00000481468 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
GFM1-209ENST00000481468 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
GFM1-209ENST00000481468 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
GFM1-209ENST00000481468 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
GFM1-209ENST00000481468 POTEHQ6S545 545 aa15.13■□□□□ 0.01
GFM1-209ENST00000481468 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
GFM1-209ENST00000481468 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
GFM1-209ENST00000481468 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
GFM1-209ENST00000481468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
GFM1-209ENST00000481468 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
GFM1-209ENST00000481468 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
GFM1-209ENST00000481468 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
GFM1-209ENST00000481468 ZBTB22O15209 634 aa14.29□□□□□ -0.12
GFM1-209ENST00000481468 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
GFM1-209ENST00000481468 CAPN15O75808 1086 aa14.1□□□□□ -0.15
GFM1-209ENST00000481468 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
GFM1-209ENST00000481468 DSG3P32926 999 aa14.08□□□□□ -0.16
GFM1-209ENST00000481468 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
GFM1-209ENST00000481468 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
GFM1-209ENST00000481468 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
GFM1-209ENST00000481468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
GFM1-209ENST00000481468 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
GFM1-209ENST00000481468 ABCB7O75027 752 aa13.91□□□□□ -0.18
GFM1-209ENST00000481468 NISCHQ9Y2I1 1504 aa13.86□□□□□ -0.19
GFM1-209ENST00000481468 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
GFM1-209ENST00000481468 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
GFM1-209ENST00000481468 APLP2Q06481 763 aa13.82□□□□□ -0.2
GFM1-209ENST00000481468 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
GFM1-209ENST00000481468 POLA2Q14181 598 aa13.71□□□□□ -0.21
GFM1-209ENST00000481468 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
GFM1-209ENST00000481468 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
GFM1-209ENST00000481468 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
GFM1-209ENST00000481468 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
GFM1-209ENST00000481468 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
GFM1-209ENST00000481468 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
GFM1-209ENST00000481468 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
GFM1-209ENST00000481468 FBLN2P98095 1184 aa13.1□□□□□ -0.31
GFM1-209ENST00000481468 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
GFM1-209ENST00000481468 HAX1O00165 279 aa13.02□□□□□ -0.33
GFM1-209ENST00000481468 EVX2Q03828 476 aa13.01□□□□□ -0.33
GFM1-209ENST00000481468 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
GFM1-209ENST00000481468 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
GFM1-209ENST00000481468 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
GFM1-209ENST00000481468 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
GFM1-209ENST00000481468 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
GFM1-209ENST00000481468 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
GFM1-209ENST00000481468 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
GFM1-209ENST00000481468 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
GFM1-209ENST00000481468 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
GFM1-209ENST00000481468 LHX8Q68G74 356 aa12.78□□□□□ -0.36
GFM1-209ENST00000481468 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
GFM1-209ENST00000481468 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
GFM1-209ENST00000481468 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
GFM1-209ENST00000481468 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
GFM1-209ENST00000481468 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
GFM1-209ENST00000481468 CHADLQ6NUI6 762 aa12.53□□□□□ -0.4
GFM1-209ENST00000481468 PROM2Q8N271 834 aa12.52□□□□□ -0.41
GFM1-209ENST00000481468 GABBR2O75899 941 aa12.5□□□□□ -0.41
GFM1-209ENST00000481468 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
GFM1-209ENST00000481468 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
GFM1-209ENST00000481468 FKBP8Q14318 412 aa12.45□□□□□ -0.42
GFM1-209ENST00000481468 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
GFM1-209ENST00000481468 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
GFM1-209ENST00000481468 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
GFM1-209ENST00000481468 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
GFM1-209ENST00000481468 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
GFM1-209ENST00000481468 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
GFM1-209ENST00000481468 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
GFM1-209ENST00000481468 POTEMA6NI47 508 aa12.11□□□□□ -0.47
GFM1-209ENST00000481468 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
GFM1-209ENST00000481468 MIER1Q8N108 512 aa12.06□□□□□ -0.48
GFM1-209ENST00000481468 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
GFM1-209ENST00000481468 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
GFM1-209ENST00000481468 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
GFM1-209ENST00000481468 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
GFM1-209ENST00000481468 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
GFM1-209ENST00000481468 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
GFM1-209ENST00000481468 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
GFM1-209ENST00000481468 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
GFM1-209ENST00000481468 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms