RNA–Protein interactions for RNA: ENST00000480760.1

CTSS-204, Transcript of cathepsin S, humanhuman

TSL 3

Gene CTSS, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-204ENST00000480760 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
CTSS-204ENST00000480760 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
CTSS-204ENST00000480760 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
CTSS-204ENST00000480760 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
CTSS-204ENST00000480760 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
CTSS-204ENST00000480760 FOXD1Q16676 465 aa16.28■□□□□ 0.2
CTSS-204ENST00000480760 ADRA2BP18089 450 aa15.89■□□□□ 0.13
CTSS-204ENST00000480760 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
CTSS-204ENST00000480760 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
CTSS-204ENST00000480760 MSH5O43196 834 aa14.93□□□□□ -0.02
CTSS-204ENST00000480760 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
CTSS-204ENST00000480760 KCNA4P22459 653 aa14.8□□□□□ -0.04
CTSS-204ENST00000480760 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
CTSS-204ENST00000480760 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
CTSS-204ENST00000480760 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
CTSS-204ENST00000480760 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
CTSS-204ENST00000480760 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
CTSS-204ENST00000480760 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
CTSS-204ENST00000480760 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
CTSS-204ENST00000480760 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
CTSS-204ENST00000480760 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
CTSS-204ENST00000480760 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
CTSS-204ENST00000480760 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
CTSS-204ENST00000480760 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
CTSS-204ENST00000480760 ZBTB22O15209 634 aa13.6□□□□□ -0.23
CTSS-204ENST00000480760 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
CTSS-204ENST00000480760 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
CTSS-204ENST00000480760 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
CTSS-204ENST00000480760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTSS-204ENST00000480760 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
CTSS-204ENST00000480760 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
CTSS-204ENST00000480760 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
CTSS-204ENST00000480760 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
CTSS-204ENST00000480760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
CTSS-204ENST00000480760 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
CTSS-204ENST00000480760 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
CTSS-204ENST00000480760 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
CTSS-204ENST00000480760 APLP2Q06481 763 aa12.82□□□□□ -0.36
CTSS-204ENST00000480760 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
CTSS-204ENST00000480760 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
CTSS-204ENST00000480760 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
CTSS-204ENST00000480760 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
CTSS-204ENST00000480760 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
CTSS-204ENST00000480760 CAPN15O75808 1086 aa12.56□□□□□ -0.4
CTSS-204ENST00000480760 POLA2Q14181 598 aa12.43□□□□□ -0.42
CTSS-204ENST00000480760 FKBP8Q14318 412 aa12.43□□□□□ -0.42
CTSS-204ENST00000480760 ABCB7O75027 752 aa12.33□□□□□ -0.44
CTSS-204ENST00000480760 FBLN2P98095 1184 aa12.33□□□□□ -0.44
CTSS-204ENST00000480760 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
CTSS-204ENST00000480760 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
CTSS-204ENST00000480760 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
CTSS-204ENST00000480760 DSG3P32926 999 aa12.28□□□□□ -0.44
CTSS-204ENST00000480760 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
CTSS-204ENST00000480760 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
CTSS-204ENST00000480760 PROM2Q8N271 834 aa11.99□□□□□ -0.49
CTSS-204ENST00000480760 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
CTSS-204ENST00000480760 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
CTSS-204ENST00000480760 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
CTSS-204ENST00000480760 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
CTSS-204ENST00000480760 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
CTSS-204ENST00000480760 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
CTSS-204ENST00000480760 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
CTSS-204ENST00000480760 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
CTSS-204ENST00000480760 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
CTSS-204ENST00000480760 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
CTSS-204ENST00000480760 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
CTSS-204ENST00000480760 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
CTSS-204ENST00000480760 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
CTSS-204ENST00000480760 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
CTSS-204ENST00000480760 IFNLR1Q8IU57 520 aaPredicted RBP11.61□□□□□ -0.55
CTSS-204ENST00000480760 MIER1Q8N108 512 aa11.54□□□□□ -0.56
CTSS-204ENST00000480760 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
CTSS-204ENST00000480760 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
CTSS-204ENST00000480760 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
CTSS-204ENST00000480760 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
CTSS-204ENST00000480760 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
CTSS-204ENST00000480760 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
CTSS-204ENST00000480760 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
CTSS-204ENST00000480760 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
CTSS-204ENST00000480760 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
CTSS-204ENST00000480760 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
CTSS-204ENST00000480760 PKD2Q13563 968 aa11.32□□□□□ -0.6
CTSS-204ENST00000480760 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
CTSS-204ENST00000480760 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
CTSS-204ENST00000480760 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
CTSS-204ENST00000480760 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
CTSS-204ENST00000480760 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
CTSS-204ENST00000480760 NUBP1P53384 320 aa11.19□□□□□ -0.62
CTSS-204ENST00000480760 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
CTSS-204ENST00000480760 GSE1Q14687 1217 aa11.16□□□□□ -0.62
CTSS-204ENST00000480760 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
CTSS-204ENST00000480760 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
CTSS-204ENST00000480760 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
CTSS-204ENST00000480760 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
CTSS-204ENST00000480760 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
CTSS-204ENST00000480760 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTSS-204ENST00000480760 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
CTSS-204ENST00000480760 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
CTSS-204ENST00000480760 RGL2O15211 777 aa11.08□□□□□ -0.64
CTSS-204ENST00000480760 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms