RNA–Protein interactions for RNA: ENST00000479515.1

PHTF2-212, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 2,467 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-212ENST00000479515 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
PHTF2-212ENST00000479515 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
PHTF2-212ENST00000479515 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
PHTF2-212ENST00000479515 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
PHTF2-212ENST00000479515 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
PHTF2-212ENST00000479515 ADRA2BP18089 450 aa12.59□□□□□ -0.39
PHTF2-212ENST00000479515 FOXD1Q16676 465 aa12.57□□□□□ -0.4
PHTF2-212ENST00000479515 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
PHTF2-212ENST00000479515 KCNA4P22459 653 aa12.21□□□□□ -0.45
PHTF2-212ENST00000479515 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
PHTF2-212ENST00000479515 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
PHTF2-212ENST00000479515 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
PHTF2-212ENST00000479515 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
PHTF2-212ENST00000479515 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
PHTF2-212ENST00000479515 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
PHTF2-212ENST00000479515 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
PHTF2-212ENST00000479515 SCAF1Q9H7N4 1312 aaKnown RBP11.48□□□□□ -0.57
PHTF2-212ENST00000479515 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
PHTF2-212ENST00000479515 MSH5O43196 834 aa11.4□□□□□ -0.58
PHTF2-212ENST00000479515 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
PHTF2-212ENST00000479515 ZBTB22O15209 634 aa11.22□□□□□ -0.61
PHTF2-212ENST00000479515 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
PHTF2-212ENST00000479515 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
PHTF2-212ENST00000479515 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
PHTF2-212ENST00000479515 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
PHTF2-212ENST00000479515 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.67
PHTF2-212ENST00000479515 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
PHTF2-212ENST00000479515 SLC4A2P04920 1241 aa10.77□□□□□ -0.69
PHTF2-212ENST00000479515 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
PHTF2-212ENST00000479515 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
PHTF2-212ENST00000479515 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
PHTF2-212ENST00000479515 FKBP8Q14318 412 aa10.49□□□□□ -0.73
PHTF2-212ENST00000479515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.48□□□□□ -0.733e-8■■■■□ 20.1
PHTF2-212ENST00000479515 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
PHTF2-212ENST00000479515 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
PHTF2-212ENST00000479515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
PHTF2-212ENST00000479515 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
PHTF2-212ENST00000479515 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
PHTF2-212ENST00000479515 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
PHTF2-212ENST00000479515 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
PHTF2-212ENST00000479515 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
PHTF2-212ENST00000479515 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
PHTF2-212ENST00000479515 APLP2Q06481 763 aa10.12□□□□□ -0.79
PHTF2-212ENST00000479515 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
PHTF2-212ENST00000479515 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
PHTF2-212ENST00000479515 FBXO3Q9UK99 471 aa9.96□□□□□ -0.81
PHTF2-212ENST00000479515 FBLN2P98095 1184 aa9.92□□□□□ -0.82
PHTF2-212ENST00000479515 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
PHTF2-212ENST00000479515 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
PHTF2-212ENST00000479515 POLA2Q14181 598 aa9.89□□□□□ -0.83
PHTF2-212ENST00000479515 CAPN15O75808 1086 aa9.88□□□□□ -0.83
PHTF2-212ENST00000479515 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
PHTF2-212ENST00000479515 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
PHTF2-212ENST00000479515 PROM2Q8N271 834 aa9.77□□□□□ -0.85
PHTF2-212ENST00000479515 ABCB7O75027 752 aa9.73□□□□□ -0.85
PHTF2-212ENST00000479515 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
PHTF2-212ENST00000479515 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
PHTF2-212ENST00000479515 ZBTB12Q9Y330 459 aaPredicted RBP9.72□□□□□ -0.85
PHTF2-212ENST00000479515 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
PHTF2-212ENST00000479515 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
PHTF2-212ENST00000479515 CCDC180Q9P1Z9 1646 aa9.65□□□□□ -0.86
PHTF2-212ENST00000479515 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
PHTF2-212ENST00000479515 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
PHTF2-212ENST00000479515 ZNF692Q9BU19 519 aaPredicted RBP9.59□□□□□ -0.87
PHTF2-212ENST00000479515 PKD2Q13563 968 aa9.56□□□□□ -0.88
PHTF2-212ENST00000479515 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
PHTF2-212ENST00000479515 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.89
PHTF2-212ENST00000479515 DSG3P32926 999 aa9.51□□□□□ -0.89
PHTF2-212ENST00000479515 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
PHTF2-212ENST00000479515 SPOCK2Q92563 424 aa9.5□□□□□ -0.89
PHTF2-212ENST00000479515 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
PHTF2-212ENST00000479515 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
PHTF2-212ENST00000479515 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
PHTF2-212ENST00000479515 STAG3Q9UJ98 1225 aa9.48□□□□□ -0.89
PHTF2-212ENST00000479515 PABPN1Q86U42 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
PHTF2-212ENST00000479515 MIER1Q8N108 512 aa9.45□□□□□ -0.9
PHTF2-212ENST00000479515 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
PHTF2-212ENST00000479515 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
PHTF2-212ENST00000479515 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.4□□□□□ -0.91
PHTF2-212ENST00000479515 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
PHTF2-212ENST00000479515 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
PHTF2-212ENST00000479515 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
PHTF2-212ENST00000479515 RGL2O15211 777 aa9.32□□□□□ -0.92
PHTF2-212ENST00000479515 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PHTF2-212ENST00000479515 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
PHTF2-212ENST00000479515 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
PHTF2-212ENST00000479515 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
PHTF2-212ENST00000479515 BCANQ96GW7 911 aa9.3□□□□□ -0.92
PHTF2-212ENST00000479515 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
PHTF2-212ENST00000479515 CACNB1Q02641 598 aaPredicted RBP9.26□□□□□ -0.93
PHTF2-212ENST00000479515 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
PHTF2-212ENST00000479515 SPRYD3Q8NCJ5 442 aa9.23□□□□□ -0.93
PHTF2-212ENST00000479515 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
PHTF2-212ENST00000479515 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
PHTF2-212ENST00000479515 ZCCHC6Q5VYS8 1495 aaKnown RBP9.15□□□□□ -0.94
PHTF2-212ENST00000479515 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
PHTF2-212ENST00000479515 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
PHTF2-212ENST00000479515 PRKCSHP14314 528 aaPredicted RBP9.13□□□□□ -0.95
PHTF2-212ENST00000479515 GSE1Q14687 1217 aa9.13□□□□□ -0.95
PHTF2-212ENST00000479515 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms