RNA–Protein interactions for RNA: ENST00000475352.1

KCNMA1-218, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-218ENST00000475352 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
KCNMA1-218ENST00000475352 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
KCNMA1-218ENST00000475352 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
KCNMA1-218ENST00000475352 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
KCNMA1-218ENST00000475352 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.37
KCNMA1-218ENST00000475352 FOXD1Q16676 465 aa22.83■■□□□ 1.25
KCNMA1-218ENST00000475352 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
KCNMA1-218ENST00000475352 ADRA2BP18089 450 aa22.23■■□□□ 1.15
KCNMA1-218ENST00000475352 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
KCNMA1-218ENST00000475352 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
KCNMA1-218ENST00000475352 MSH5O43196 834 aa20.95■□□□□ 0.94
KCNMA1-218ENST00000475352 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
KCNMA1-218ENST00000475352 KCNA4P22459 653 aa20.79■□□□□ 0.92
KCNMA1-218ENST00000475352 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
KCNMA1-218ENST00000475352 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
KCNMA1-218ENST00000475352 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
KCNMA1-218ENST00000475352 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-218ENST00000475352 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
KCNMA1-218ENST00000475352 SLC4A1APQ9BWU0 796 aaKnown RBP19.88■□□□□ 0.77
KCNMA1-218ENST00000475352 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
KCNMA1-218ENST00000475352 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
KCNMA1-218ENST00000475352 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
KCNMA1-218ENST00000475352 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
KCNMA1-218ENST00000475352 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
KCNMA1-218ENST00000475352 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
KCNMA1-218ENST00000475352 ZBTB22O15209 634 aa19.15■□□□□ 0.66
KCNMA1-218ENST00000475352 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.64
KCNMA1-218ENST00000475352 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
KCNMA1-218ENST00000475352 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
KCNMA1-218ENST00000475352 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
KCNMA1-218ENST00000475352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.56
KCNMA1-218ENST00000475352 ATXN8OSP0DMR3 200 aa18.44■□□□□ 0.54
KCNMA1-218ENST00000475352 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
KCNMA1-218ENST00000475352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
KCNMA1-218ENST00000475352 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
KCNMA1-218ENST00000475352 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
KCNMA1-218ENST00000475352 APLP2Q06481 763 aa18.02■□□□□ 0.48
KCNMA1-218ENST00000475352 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
KCNMA1-218ENST00000475352 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
KCNMA1-218ENST00000475352 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
KCNMA1-218ENST00000475352 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
KCNMA1-218ENST00000475352 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-218ENST00000475352 CAPN15O75808 1086 aa17.54■□□□□ 0.4
KCNMA1-218ENST00000475352 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
KCNMA1-218ENST00000475352 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
KCNMA1-218ENST00000475352 FKBP8Q14318 412 aa17.45■□□□□ 0.38
KCNMA1-218ENST00000475352 POLA2Q14181 598 aa17.39■□□□□ 0.37
KCNMA1-218ENST00000475352 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
KCNMA1-218ENST00000475352 FBLN2P98095 1184 aa17.28■□□□□ 0.36
KCNMA1-218ENST00000475352 DSG3P32926 999 aa17.23■□□□□ 0.35
KCNMA1-218ENST00000475352 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-218ENST00000475352 ABCB7O75027 752 aa17.22■□□□□ 0.35
KCNMA1-218ENST00000475352 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
KCNMA1-218ENST00000475352 PROM2Q8N271 834 aa16.97■□□□□ 0.31
KCNMA1-218ENST00000475352 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
KCNMA1-218ENST00000475352 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
KCNMA1-218ENST00000475352 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
KCNMA1-218ENST00000475352 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
KCNMA1-218ENST00000475352 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
KCNMA1-218ENST00000475352 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
KCNMA1-218ENST00000475352 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-218ENST00000475352 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-218ENST00000475352 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
KCNMA1-218ENST00000475352 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
KCNMA1-218ENST00000475352 PABPN1Q86U42 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
KCNMA1-218ENST00000475352 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-218ENST00000475352 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
KCNMA1-218ENST00000475352 POTEHQ6S545 545 aa16.34■□□□□ 0.21
KCNMA1-218ENST00000475352 IFNLR1Q8IU57 520 aaPredicted RBP16.32■□□□□ 0.2
KCNMA1-218ENST00000475352 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
KCNMA1-218ENST00000475352 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
KCNMA1-218ENST00000475352 SPDYE1Q8NFV5 336 aaPredicted RBP16.17■□□□□ 0.18
KCNMA1-218ENST00000475352 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
KCNMA1-218ENST00000475352 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
KCNMA1-218ENST00000475352 MIER1Q8N108 512 aa16.11■□□□□ 0.17
KCNMA1-218ENST00000475352 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
KCNMA1-218ENST00000475352 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
KCNMA1-218ENST00000475352 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
KCNMA1-218ENST00000475352 ZBTB47Q9UFB7 747 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-218ENST00000475352 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
KCNMA1-218ENST00000475352 PRR29P0C7W0 189 aa15.94■□□□□ 0.14
KCNMA1-218ENST00000475352 PKD2Q13563 968 aa15.94■□□□□ 0.14
KCNMA1-218ENST00000475352 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
KCNMA1-218ENST00000475352 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
KCNMA1-218ENST00000475352 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
KCNMA1-218ENST00000475352 ECM2O94769 699 aaPredicted RBP15.74■□□□□ 0.11
KCNMA1-218ENST00000475352 NUBP1P53384 320 aa15.74■□□□□ 0.11
KCNMA1-218ENST00000475352 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
KCNMA1-218ENST00000475352 GSE1Q14687 1217 aa15.68■□□□□ 0.1
KCNMA1-218ENST00000475352 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
KCNMA1-218ENST00000475352 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
KCNMA1-218ENST00000475352 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
KCNMA1-218ENST00000475352 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
KCNMA1-218ENST00000475352 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
KCNMA1-218ENST00000475352 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
KCNMA1-218ENST00000475352 RGL2O15211 777 aa15.57■□□□□ 0.08
KCNMA1-218ENST00000475352 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
KCNMA1-218ENST00000475352 CHADLQ6NUI6 762 aa15.54■□□□□ 0.08
KCNMA1-218ENST00000475352 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
KCNMA1-218ENST00000475352 RASEFQ8IZ41 740 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms