RNA–Protein interactions for RNA: ENST00000472566.1

USP24-202, Transcript of ubiquitin specific peptidase 24, humanhuman

TSL 3

Gene USP24, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP24-202ENST00000472566 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
USP24-202ENST00000472566 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
USP24-202ENST00000472566 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
USP24-202ENST00000472566 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
USP24-202ENST00000472566 FOXD1Q16676 465 aa19.29■□□□□ 0.68
USP24-202ENST00000472566 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
USP24-202ENST00000472566 MSH5O43196 834 aa18.06■□□□□ 0.48
USP24-202ENST00000472566 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
USP24-202ENST00000472566 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
USP24-202ENST00000472566 ADRA2BP18089 450 aa17.96■□□□□ 0.47
USP24-202ENST00000472566 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
USP24-202ENST00000472566 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
USP24-202ENST00000472566 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
USP24-202ENST00000472566 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
USP24-202ENST00000472566 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
USP24-202ENST00000472566 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
USP24-202ENST00000472566 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
USP24-202ENST00000472566 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
USP24-202ENST00000472566 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
USP24-202ENST00000472566 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
USP24-202ENST00000472566 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
USP24-202ENST00000472566 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
USP24-202ENST00000472566 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
USP24-202ENST00000472566 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
USP24-202ENST00000472566 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
USP24-202ENST00000472566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 04e-7■■■■□ 21.5
USP24-202ENST00000472566 KCNA4P22459 653 aa14.91□□□□□ -0.02
USP24-202ENST00000472566 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
USP24-202ENST00000472566 CAPN15O75808 1086 aa14.54□□□□□ -0.08
USP24-202ENST00000472566 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
USP24-202ENST00000472566 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
USP24-202ENST00000472566 DSG3P32926 999 aa14.41□□□□□ -0.1
USP24-202ENST00000472566 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
USP24-202ENST00000472566 APLP2Q06481 763 aa14.29□□□□□ -0.12
USP24-202ENST00000472566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
USP24-202ENST00000472566 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
USP24-202ENST00000472566 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
USP24-202ENST00000472566 ABCB7O75027 752 aa14.22□□□□□ -0.13
USP24-202ENST00000472566 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
USP24-202ENST00000472566 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
USP24-202ENST00000472566 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
USP24-202ENST00000472566 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
USP24-202ENST00000472566 POTEHQ6S545 545 aa13.88□□□□□ -0.19
USP24-202ENST00000472566 POLA2Q14181 598 aa13.87□□□□□ -0.19
USP24-202ENST00000472566 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
USP24-202ENST00000472566 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
USP24-202ENST00000472566 ZBTB22O15209 634 aa13.7□□□□□ -0.22
USP24-202ENST00000472566 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
USP24-202ENST00000472566 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
USP24-202ENST00000472566 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
USP24-202ENST00000472566 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
USP24-202ENST00000472566 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
USP24-202ENST00000472566 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
USP24-202ENST00000472566 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
USP24-202ENST00000472566 FBLN2P98095 1184 aa13.25□□□□□ -0.29
USP24-202ENST00000472566 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
USP24-202ENST00000472566 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
USP24-202ENST00000472566 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
USP24-202ENST00000472566 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
USP24-202ENST00000472566 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
USP24-202ENST00000472566 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
USP24-202ENST00000472566 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■□ 20.1
USP24-202ENST00000472566 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
USP24-202ENST00000472566 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
USP24-202ENST00000472566 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
USP24-202ENST00000472566 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
USP24-202ENST00000472566 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
USP24-202ENST00000472566 HAX1O00165 279 aa12.95□□□□□ -0.34
USP24-202ENST00000472566 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
USP24-202ENST00000472566 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
USP24-202ENST00000472566 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
USP24-202ENST00000472566 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
USP24-202ENST00000472566 EVX2Q03828 476 aa12.77□□□□□ -0.37
USP24-202ENST00000472566 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
USP24-202ENST00000472566 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
USP24-202ENST00000472566 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
USP24-202ENST00000472566 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
USP24-202ENST00000472566 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
USP24-202ENST00000472566 GABBR2O75899 941 aa12.47□□□□□ -0.41
USP24-202ENST00000472566 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
USP24-202ENST00000472566 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
USP24-202ENST00000472566 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
USP24-202ENST00000472566 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
USP24-202ENST00000472566 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
USP24-202ENST00000472566 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
USP24-202ENST00000472566 CLCN6P51797 869 aa12.19□□□□□ -0.46
USP24-202ENST00000472566 LHX8Q68G74 356 aa12.19□□□□□ -0.46
USP24-202ENST00000472566 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
USP24-202ENST00000472566 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
USP24-202ENST00000472566 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
USP24-202ENST00000472566 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
USP24-202ENST00000472566 PROM2Q8N271 834 aa12.13□□□□□ -0.47
USP24-202ENST00000472566 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
USP24-202ENST00000472566 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
USP24-202ENST00000472566 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
USP24-202ENST00000472566 MIER1Q8N108 512 aa11.94□□□□□ -0.5
USP24-202ENST00000472566 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
USP24-202ENST00000472566 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
USP24-202ENST00000472566 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
USP24-202ENST00000472566 FKBP8Q14318 412 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms