RNA–Protein interactions for RNA: ENST00000471654.1

KLHL29-202, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 6,385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-202ENST00000471654 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
KLHL29-202ENST00000471654 EHMT2Q96KQ7 1210 aa21.43■■□□□ 1.02
KLHL29-202ENST00000471654 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
KLHL29-202ENST00000471654 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
KLHL29-202ENST00000471654 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
KLHL29-202ENST00000471654 APLP2Q06481 763 aa20.78■□□□□ 0.92
KLHL29-202ENST00000471654 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
KLHL29-202ENST00000471654 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
KLHL29-202ENST00000471654 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
KLHL29-202ENST00000471654 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
KLHL29-202ENST00000471654 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
KLHL29-202ENST00000471654 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
KLHL29-202ENST00000471654 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
KLHL29-202ENST00000471654 ERICH6Q7L0X2 663 aa20.11■□□□□ 0.81
KLHL29-202ENST00000471654 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
KLHL29-202ENST00000471654 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
KLHL29-202ENST00000471654 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
KLHL29-202ENST00000471654 MYT1Q01538 1121 aa19.82■□□□□ 0.76
KLHL29-202ENST00000471654 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
KLHL29-202ENST00000471654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
KLHL29-202ENST00000471654 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
KLHL29-202ENST00000471654 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
KLHL29-202ENST00000471654 POLR3GLQ9BT43 218 aa19.64■□□□□ 0.73
KLHL29-202ENST00000471654 HRCP23327 699 aa19.61■□□□□ 0.73
KLHL29-202ENST00000471654 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
KLHL29-202ENST00000471654 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.71
KLHL29-202ENST00000471654 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
KLHL29-202ENST00000471654 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
KLHL29-202ENST00000471654 NEFLP07196 543 aa19.49■□□□□ 0.71
KLHL29-202ENST00000471654 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
KLHL29-202ENST00000471654 ITGAEP38570 1179 aa19.34■□□□□ 0.69
KLHL29-202ENST00000471654 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
KLHL29-202ENST00000471654 PPARGC1BQ86YN6 1023 aaKnown RBP19.29■□□□□ 0.68
KLHL29-202ENST00000471654 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
KLHL29-202ENST00000471654 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
KLHL29-202ENST00000471654 BCANQ96GW7 911 aa19.01■□□□□ 0.63
KLHL29-202ENST00000471654 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
KLHL29-202ENST00000471654 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
KLHL29-202ENST00000471654 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
KLHL29-202ENST00000471654 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
KLHL29-202ENST00000471654 FBLN2P98095 1184 aa18.84■□□□□ 0.61
KLHL29-202ENST00000471654 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
KLHL29-202ENST00000471654 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
KLHL29-202ENST00000471654 GTF3C3Q9Y5Q9 886 aa18.72■□□□□ 0.59
KLHL29-202ENST00000471654 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
KLHL29-202ENST00000471654 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
KLHL29-202ENST00000471654 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
KLHL29-202ENST00000471654 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
KLHL29-202ENST00000471654 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
KLHL29-202ENST00000471654 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
KLHL29-202ENST00000471654 A0A0G2JS52 829 aa18.48■□□□□ 0.55
KLHL29-202ENST00000471654 RTL5Q5HYW3 569 aaPredicted RBP18.48■□□□□ 0.55
KLHL29-202ENST00000471654 NEFMP07197 916 aa18.48■□□□□ 0.55
KLHL29-202ENST00000471654 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
KLHL29-202ENST00000471654 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
KLHL29-202ENST00000471654 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
KLHL29-202ENST00000471654 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
KLHL29-202ENST00000471654 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
KLHL29-202ENST00000471654 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
KLHL29-202ENST00000471654 PLEKHG5O94827 1062 aa18.3■□□□□ 0.52
KLHL29-202ENST00000471654 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
KLHL29-202ENST00000471654 CDK11AQ9UQ88 783 aaPredicted RBP18.24■□□□□ 0.51
KLHL29-202ENST00000471654 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
KLHL29-202ENST00000471654 ZBTB7CA1YPR0 619 aa18.17■□□□□ 0.5
KLHL29-202ENST00000471654 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
KLHL29-202ENST00000471654 ANP32CO43423 234 aa18.16■□□□□ 0.5
KLHL29-202ENST00000471654 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
KLHL29-202ENST00000471654 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
KLHL29-202ENST00000471654 ABCC9O60706 1549 aa18.04■□□□□ 0.48
KLHL29-202ENST00000471654 NPM2Q86SE8 214 aaKnown RBP18.02■□□□□ 0.47
KLHL29-202ENST00000471654 C14orf37Q86TY3 774 aa18.02■□□□□ 0.47
KLHL29-202ENST00000471654 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
KLHL29-202ENST00000471654 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
KLHL29-202ENST00000471654 FKBP8Q14318 412 aa17.94■□□□□ 0.46
KLHL29-202ENST00000471654 HSP90AA1P07900 732 aaKnown RBP17.93■□□□□ 0.46
KLHL29-202ENST00000471654 CDK11BP21127 795 aaKnown RBP17.93■□□□□ 0.46
KLHL29-202ENST00000471654 ARXQ96QS3 562 aa17.92■□□□□ 0.46
KLHL29-202ENST00000471654 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
KLHL29-202ENST00000471654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
KLHL29-202ENST00000471654 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
KLHL29-202ENST00000471654 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
KLHL29-202ENST00000471654 NPHP1O15259 732 aa17.78■□□□□ 0.44
KLHL29-202ENST00000471654 ANP32BQ92688 251 aaKnown RBP17.77■□□□□ 0.43
KLHL29-202ENST00000471654 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
KLHL29-202ENST00000471654 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
KLHL29-202ENST00000471654 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
KLHL29-202ENST00000471654 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
KLHL29-202ENST00000471654 MIER1Q8N108 512 aa17.73■□□□□ 0.43
KLHL29-202ENST00000471654 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
KLHL29-202ENST00000471654 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
KLHL29-202ENST00000471654 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
KLHL29-202ENST00000471654 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
KLHL29-202ENST00000471654 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
KLHL29-202ENST00000471654 NBR1Q14596 966 aa17.65■□□□□ 0.42
KLHL29-202ENST00000471654 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
KLHL29-202ENST00000471654 KDM2AQ9Y2K7 1162 aa17.62■□□□□ 0.41
KLHL29-202ENST00000471654 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
KLHL29-202ENST00000471654 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
KLHL29-202ENST00000471654 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
KLHL29-202ENST00000471654 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms