RNA–Protein interactions for RNA: ENST00000470085.5

GCSAM-203, Transcript of germinal center associated signaling and motility, humanhuman

TSL 2

Gene GCSAM, Length 1,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-203ENST00000470085 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
GCSAM-203ENST00000470085 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
GCSAM-203ENST00000470085 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
GCSAM-203ENST00000470085 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
GCSAM-203ENST00000470085 FOXD1Q16676 465 aa17.19■□□□□ 0.34
GCSAM-203ENST00000470085 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
GCSAM-203ENST00000470085 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
GCSAM-203ENST00000470085 MSH5O43196 834 aa16.13■□□□□ 0.17
GCSAM-203ENST00000470085 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
GCSAM-203ENST00000470085 ADRA2BP18089 450 aa16.1■□□□□ 0.17
GCSAM-203ENST00000470085 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
GCSAM-203ENST00000470085 SCAF1Q9H7N4 1312 aaKnown RBP14.86□□□□□ -0.03
GCSAM-203ENST00000470085 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
GCSAM-203ENST00000470085 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
GCSAM-203ENST00000470085 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
GCSAM-203ENST00000470085 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
GCSAM-203ENST00000470085 HOXD11P31277 338 aaPredicted RBP14.22□□□□□ -0.13
GCSAM-203ENST00000470085 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
GCSAM-203ENST00000470085 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
GCSAM-203ENST00000470085 DCAF8L1A6NGE4 600 aa14.05□□□□□ -0.16
GCSAM-203ENST00000470085 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
GCSAM-203ENST00000470085 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
GCSAM-203ENST00000470085 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
GCSAM-203ENST00000470085 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
GCSAM-203ENST00000470085 KCNA4P22459 653 aa13.69□□□□□ -0.22
GCSAM-203ENST00000470085 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
GCSAM-203ENST00000470085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
GCSAM-203ENST00000470085 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
GCSAM-203ENST00000470085 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
GCSAM-203ENST00000470085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
GCSAM-203ENST00000470085 APLP2Q06481 763 aa13.02□□□□□ -0.33
GCSAM-203ENST00000470085 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
GCSAM-203ENST00000470085 CAPN15O75808 1086 aa13□□□□□ -0.33
GCSAM-203ENST00000470085 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
GCSAM-203ENST00000470085 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
GCSAM-203ENST00000470085 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
GCSAM-203ENST00000470085 DSG3P32926 999 aa12.89□□□□□ -0.35
GCSAM-203ENST00000470085 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
GCSAM-203ENST00000470085 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
GCSAM-203ENST00000470085 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
GCSAM-203ENST00000470085 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
GCSAM-203ENST00000470085 ABCB7O75027 752 aa12.66□□□□□ -0.38
GCSAM-203ENST00000470085 NISCHQ9Y2I1 1504 aa12.62□□□□□ -0.39
GCSAM-203ENST00000470085 ZBTB22O15209 634 aa12.56□□□□□ -0.4
GCSAM-203ENST00000470085 POLA2Q14181 598 aa12.5□□□□□ -0.41
GCSAM-203ENST00000470085 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
GCSAM-203ENST00000470085 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
GCSAM-203ENST00000470085 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
GCSAM-203ENST00000470085 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
GCSAM-203ENST00000470085 POTEHQ6S545 545 aa12.14□□□□□ -0.47
GCSAM-203ENST00000470085 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
GCSAM-203ENST00000470085 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
GCSAM-203ENST00000470085 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
GCSAM-203ENST00000470085 FBLN2P98095 1184 aa12.08□□□□□ -0.48
GCSAM-203ENST00000470085 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
GCSAM-203ENST00000470085 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
GCSAM-203ENST00000470085 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
GCSAM-203ENST00000470085 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
GCSAM-203ENST00000470085 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
GCSAM-203ENST00000470085 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
GCSAM-203ENST00000470085 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
GCSAM-203ENST00000470085 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
GCSAM-203ENST00000470085 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
GCSAM-203ENST00000470085 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
GCSAM-203ENST00000470085 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
GCSAM-203ENST00000470085 SPDYE1Q8NFV5 336 aaPredicted RBP11.71□□□□□ -0.53
GCSAM-203ENST00000470085 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
GCSAM-203ENST00000470085 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
GCSAM-203ENST00000470085 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
GCSAM-203ENST00000470085 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
GCSAM-203ENST00000470085 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
GCSAM-203ENST00000470085 HAX1O00165 279 aa11.47□□□□□ -0.57
GCSAM-203ENST00000470085 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
GCSAM-203ENST00000470085 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
GCSAM-203ENST00000470085 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
GCSAM-203ENST00000470085 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
GCSAM-203ENST00000470085 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
GCSAM-203ENST00000470085 EVX2Q03828 476 aa11.27□□□□□ -0.61
GCSAM-203ENST00000470085 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
GCSAM-203ENST00000470085 PROM2Q8N271 834 aa11.23□□□□□ -0.61
GCSAM-203ENST00000470085 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
GCSAM-203ENST00000470085 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
GCSAM-203ENST00000470085 GABBR2O75899 941 aa11.08□□□□□ -0.64
GCSAM-203ENST00000470085 CLCN6P51797 869 aa11.08□□□□□ -0.64
GCSAM-203ENST00000470085 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
GCSAM-203ENST00000470085 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
GCSAM-203ENST00000470085 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
GCSAM-203ENST00000470085 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
GCSAM-203ENST00000470085 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
GCSAM-203ENST00000470085 FKBP8Q14318 412 aa11□□□□□ -0.65
GCSAM-203ENST00000470085 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
GCSAM-203ENST00000470085 MIER1Q8N108 512 aa10.92□□□□□ -0.66
GCSAM-203ENST00000470085 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
GCSAM-203ENST00000470085 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
GCSAM-203ENST00000470085 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
GCSAM-203ENST00000470085 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
GCSAM-203ENST00000470085 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
GCSAM-203ENST00000470085 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
GCSAM-203ENST00000470085 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
GCSAM-203ENST00000470085 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms