RNA–Protein interactions for RNA: ENST00000469862.1

CENPF-204, Transcript of centromere protein F, humanhuman

TSL 2

Gene CENPF, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPF-204ENST00000469862 AEBP2Q6ZN18 517 aaPredicted RBP32.6■■■□□ 2.81
CENPF-204ENST00000469862 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
CENPF-204ENST00000469862 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
CENPF-204ENST00000469862 PHF23Q9BUL5 403 aaPredicted RBP27.57■■■□□ 2
CENPF-204ENST00000469862 FOXD1Q16676 465 aa26.08■■□□□ 1.77
CENPF-204ENST00000469862 MSH5O43196 834 aa24.74■■□□□ 1.55
CENPF-204ENST00000469862 POTEDQ86YR6 584 aa24.68■■□□□ 1.54
CENPF-204ENST00000469862 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
CENPF-204ENST00000469862 PIAS4Q8N2W9 510 aaPredicted RBP24.33■■□□□ 1.49
CENPF-204ENST00000469862 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
CENPF-204ENST00000469862 ADRA2BP18089 450 aa23.93■■□□□ 1.42
CENPF-204ENST00000469862 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
CENPF-204ENST00000469862 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
CENPF-204ENST00000469862 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
CENPF-204ENST00000469862 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
CENPF-204ENST00000469862 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
CENPF-204ENST00000469862 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
CENPF-204ENST00000469862 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
CENPF-204ENST00000469862 CNKSR2Q8WXI2 1034 aa21.05■□□□□ 0.96
CENPF-204ENST00000469862 RNF39Q9H2S5 420 aa20.98■□□□□ 0.95
CENPF-204ENST00000469862 RNF216Q9NWF9 866 aaPredicted RBP20.96■□□□□ 0.95
CENPF-204ENST00000469862 C1QBPQ07021 282 aaKnown RBP20.75■□□□□ 0.91
CENPF-204ENST00000469862 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
CENPF-204ENST00000469862 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
CENPF-204ENST00000469862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.831e-8■■■■□ 19.7
CENPF-204ENST00000469862 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
CENPF-204ENST00000469862 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
CENPF-204ENST00000469862 CAPN15O75808 1086 aa19.53■□□□□ 0.72
CENPF-204ENST00000469862 DSG3P32926 999 aa19.49■□□□□ 0.71
CENPF-204ENST00000469862 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
CENPF-204ENST00000469862 APLP2Q06481 763 aa19.34■□□□□ 0.69
CENPF-204ENST00000469862 POTEHQ6S545 545 aa19.31■□□□□ 0.68
CENPF-204ENST00000469862 KCNA4P22459 653 aa19.22■□□□□ 0.67
CENPF-204ENST00000469862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
CENPF-204ENST00000469862 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
CENPF-204ENST00000469862 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
CENPF-204ENST00000469862 ZNF219Q9P2Y4 722 aaPredicted RBP19.17■□□□□ 0.66
CENPF-204ENST00000469862 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
CENPF-204ENST00000469862 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
CENPF-204ENST00000469862 ABCB7O75027 752 aa18.96■□□□□ 0.63
CENPF-204ENST00000469862 RBM42Q9BTD8 480 aaKnown RBP18.77■□□□□ 0.6
CENPF-204ENST00000469862 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
CENPF-204ENST00000469862 POLA2Q14181 598 aa18.51■□□□□ 0.55
CENPF-204ENST00000469862 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
CENPF-204ENST00000469862 ZBTB12Q9Y330 459 aaPredicted RBP18.27■□□□□ 0.52
CENPF-204ENST00000469862 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
CENPF-204ENST00000469862 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
CENPF-204ENST00000469862 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
CENPF-204ENST00000469862 ATF5Q9Y2D1 282 aaPredicted RBP18.02■□□□□ 0.48
CENPF-204ENST00000469862 REM2Q8IYK8 340 aaPredicted RBP17.95■□□□□ 0.46
CENPF-204ENST00000469862 SP7Q8TDD2 431 aaPredicted RBP17.93■□□□□ 0.46
CENPF-204ENST00000469862 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
CENPF-204ENST00000469862 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
CENPF-204ENST00000469862 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
CENPF-204ENST00000469862 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
CENPF-204ENST00000469862 FXR2P51116 673 aaKnown RBP eCLIP17.69■□□□□ 0.424e-7■■■■■ 31.3
CENPF-204ENST00000469862 HAX1O00165 279 aa17.68■□□□□ 0.42
CENPF-204ENST00000469862 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
CENPF-204ENST00000469862 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
CENPF-204ENST00000469862 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
CENPF-204ENST00000469862 ZBTB22O15209 634 aa17.59■□□□□ 0.41
CENPF-204ENST00000469862 FBLN2P98095 1184 aa17.59■□□□□ 0.41
CENPF-204ENST00000469862 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
CENPF-204ENST00000469862 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
CENPF-204ENST00000469862 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
CENPF-204ENST00000469862 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
CENPF-204ENST00000469862 EVX2Q03828 476 aa17.26■□□□□ 0.35
CENPF-204ENST00000469862 SSUH2Q9Y2M2 353 aa17.25■□□□□ 0.35
CENPF-204ENST00000469862 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
CENPF-204ENST00000469862 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
CENPF-204ENST00000469862 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
CENPF-204ENST00000469862 GABBR2O75899 941 aa16.98■□□□□ 0.31
CENPF-204ENST00000469862 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
CENPF-204ENST00000469862 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
CENPF-204ENST00000469862 CLCN6P51797 869 aa16.81■□□□□ 0.28
CENPF-204ENST00000469862 LHX8Q68G74 356 aa16.81■□□□□ 0.28
CENPF-204ENST00000469862 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
CENPF-204ENST00000469862 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
CENPF-204ENST00000469862 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
CENPF-204ENST00000469862 DCBLD2Q96PD2 775 aa16.52■□□□□ 0.24
CENPF-204ENST00000469862 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CENPF-204ENST00000469862 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
CENPF-204ENST00000469862 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
CENPF-204ENST00000469862 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
CENPF-204ENST00000469862 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
CENPF-204ENST00000469862 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
CENPF-204ENST00000469862 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
CENPF-204ENST00000469862 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
CENPF-204ENST00000469862 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
CENPF-204ENST00000469862 GALR2O43603 387 aaPredicted RBP16.2■□□□□ 0.18
CENPF-204ENST00000469862 PHF12Q96QT6 1004 aa16.09■□□□□ 0.17
CENPF-204ENST00000469862 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CENPF-204ENST00000469862 OTUD5Q96G74 571 aa16.04■□□□□ 0.16
CENPF-204ENST00000469862 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
CENPF-204ENST00000469862 PLSCR2Q9NRY7 297 aa16.03■□□□□ 0.16
CENPF-204ENST00000469862 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
CENPF-204ENST00000469862 ASTLQ6HA08 431 aaPredicted RBP15.93■□□□□ 0.14
CENPF-204ENST00000469862 C7P10643 843 aa15.92■□□□□ 0.14
CENPF-204ENST00000469862 SLC39A7Q92504 469 aa15.91■□□□□ 0.14
CENPF-204ENST00000469862 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms