RNA–Protein interactions for RNA: ENST00000467658.1

TNRC6B-207, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 3

Gene TNRC6B, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-207ENST00000467658 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
TNRC6B-207ENST00000467658 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
TNRC6B-207ENST00000467658 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
TNRC6B-207ENST00000467658 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
TNRC6B-207ENST00000467658 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
TNRC6B-207ENST00000467658 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
TNRC6B-207ENST00000467658 KCNA4P22459 653 aa15.24■□□□□ 0.03
TNRC6B-207ENST00000467658 ADRA2BP18089 450 aa15.12■□□□□ 0.01
TNRC6B-207ENST00000467658 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
TNRC6B-207ENST00000467658 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
TNRC6B-207ENST00000467658 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
TNRC6B-207ENST00000467658 SLC24A1O60721 1099 aa14.42□□□□□ -0.1
TNRC6B-207ENST00000467658 FOXD1Q16676 465 aa14.38□□□□□ -0.11
TNRC6B-207ENST00000467658 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
TNRC6B-207ENST00000467658 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
TNRC6B-207ENST00000467658 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
TNRC6B-207ENST00000467658 ZBTB22O15209 634 aa14.07□□□□□ -0.16
TNRC6B-207ENST00000467658 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
TNRC6B-207ENST00000467658 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
TNRC6B-207ENST00000467658 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
TNRC6B-207ENST00000467658 NISCHQ9Y2I1 1504 aa13.66□□□□□ -0.22
TNRC6B-207ENST00000467658 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
TNRC6B-207ENST00000467658 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
TNRC6B-207ENST00000467658 FKBP8Q14318 412 aa13.36□□□□□ -0.27
TNRC6B-207ENST00000467658 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
TNRC6B-207ENST00000467658 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
TNRC6B-207ENST00000467658 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
TNRC6B-207ENST00000467658 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
TNRC6B-207ENST00000467658 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
TNRC6B-207ENST00000467658 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
TNRC6B-207ENST00000467658 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
TNRC6B-207ENST00000467658 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
TNRC6B-207ENST00000467658 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
TNRC6B-207ENST00000467658 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
TNRC6B-207ENST00000467658 MSH5O43196 834 aa12.7□□□□□ -0.38
TNRC6B-207ENST00000467658 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
TNRC6B-207ENST00000467658 BCANQ96GW7 911 aa12.69□□□□□ -0.38
TNRC6B-207ENST00000467658 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
TNRC6B-207ENST00000467658 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
TNRC6B-207ENST00000467658 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
TNRC6B-207ENST00000467658 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
TNRC6B-207ENST00000467658 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
TNRC6B-207ENST00000467658 ABCC9O60706 1549 aa12.47□□□□□ -0.41
TNRC6B-207ENST00000467658 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
TNRC6B-207ENST00000467658 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
TNRC6B-207ENST00000467658 CCDC180Q9P1Z9 1646 aa12.35□□□□□ -0.43
TNRC6B-207ENST00000467658 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
TNRC6B-207ENST00000467658 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
TNRC6B-207ENST00000467658 FBLN2P98095 1184 aa12.29□□□□□ -0.44
TNRC6B-207ENST00000467658 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
TNRC6B-207ENST00000467658 SPDYE4A6NLX3 237 aa12.27□□□□□ -0.45
TNRC6B-207ENST00000467658 PKD2Q13563 968 aa12.27□□□□□ -0.45
TNRC6B-207ENST00000467658 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
TNRC6B-207ENST00000467658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
TNRC6B-207ENST00000467658 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
TNRC6B-207ENST00000467658 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
TNRC6B-207ENST00000467658 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
TNRC6B-207ENST00000467658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
TNRC6B-207ENST00000467658 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
TNRC6B-207ENST00000467658 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
TNRC6B-207ENST00000467658 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
TNRC6B-207ENST00000467658 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
TNRC6B-207ENST00000467658 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
TNRC6B-207ENST00000467658 PROM2Q8N271 834 aa12.13□□□□□ -0.47
TNRC6B-207ENST00000467658 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
TNRC6B-207ENST00000467658 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNRC6B-207ENST00000467658 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
TNRC6B-207ENST00000467658 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
TNRC6B-207ENST00000467658 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
TNRC6B-207ENST00000467658 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
TNRC6B-207ENST00000467658 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
TNRC6B-207ENST00000467658 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
TNRC6B-207ENST00000467658 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
TNRC6B-207ENST00000467658 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
TNRC6B-207ENST00000467658 RGL2O15211 777 aa11.9□□□□□ -0.5
TNRC6B-207ENST00000467658 NBR1Q14596 966 aa11.9□□□□□ -0.5
TNRC6B-207ENST00000467658 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
TNRC6B-207ENST00000467658 ARXQ96QS3 562 aa11.88□□□□□ -0.51
TNRC6B-207ENST00000467658 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
TNRC6B-207ENST00000467658 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
TNRC6B-207ENST00000467658 APLP2Q06481 763 aa11.77□□□□□ -0.53
TNRC6B-207ENST00000467658 NACADO15069 1562 aa11.73□□□□□ -0.53
TNRC6B-207ENST00000467658 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
TNRC6B-207ENST00000467658 TMEM132AQ24JP5 1023 aa11.69□□□□□ -0.54
TNRC6B-207ENST00000467658 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
TNRC6B-207ENST00000467658 POLA2Q14181 598 aa11.65□□□□□ -0.54
TNRC6B-207ENST00000467658 HOMEZQ8IX15 550 aa11.65□□□□□ -0.54
TNRC6B-207ENST00000467658 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
TNRC6B-207ENST00000467658 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
TNRC6B-207ENST00000467658 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
TNRC6B-207ENST00000467658 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
TNRC6B-207ENST00000467658 MYO15BQ96JP2 1530 aa11.57□□□□□ -0.56
TNRC6B-207ENST00000467658 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
TNRC6B-207ENST00000467658 UNC13AQ9UPW8 1703 aa11.57□□□□□ -0.56
TNRC6B-207ENST00000467658 MIER1Q8N108 512 aa11.54□□□□□ -0.56
TNRC6B-207ENST00000467658 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
TNRC6B-207ENST00000467658 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
TNRC6B-207ENST00000467658 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
TNRC6B-207ENST00000467658 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.57
TNRC6B-207ENST00000467658 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms