RNA–Protein interactions for RNA: ENST00000463929.5

LRCH1-205, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 4

Gene LRCH1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-205ENST00000463929 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
LRCH1-205ENST00000463929 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
LRCH1-205ENST00000463929 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
LRCH1-205ENST00000463929 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
LRCH1-205ENST00000463929 FOXD1Q16676 465 aa19.07■□□□□ 0.64
LRCH1-205ENST00000463929 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
LRCH1-205ENST00000463929 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
LRCH1-205ENST00000463929 ADRA2BP18089 450 aa18.15■□□□□ 0.5
LRCH1-205ENST00000463929 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
LRCH1-205ENST00000463929 MSH5O43196 834 aa17.64■□□□□ 0.41
LRCH1-205ENST00000463929 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
LRCH1-205ENST00000463929 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
LRCH1-205ENST00000463929 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
LRCH1-205ENST00000463929 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
LRCH1-205ENST00000463929 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
LRCH1-205ENST00000463929 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
LRCH1-205ENST00000463929 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
LRCH1-205ENST00000463929 KCNA4P22459 653 aa16.1■□□□□ 0.17
LRCH1-205ENST00000463929 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
LRCH1-205ENST00000463929 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
LRCH1-205ENST00000463929 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
LRCH1-205ENST00000463929 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
LRCH1-205ENST00000463929 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
LRCH1-205ENST00000463929 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
LRCH1-205ENST00000463929 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
LRCH1-205ENST00000463929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.014e-6■□□□□ 10.2
LRCH1-205ENST00000463929 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
LRCH1-205ENST00000463929 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
LRCH1-205ENST00000463929 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
LRCH1-205ENST00000463929 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
LRCH1-205ENST00000463929 ZBTB22O15209 634 aa14.83□□□□□ -0.04
LRCH1-205ENST00000463929 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
LRCH1-205ENST00000463929 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
LRCH1-205ENST00000463929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
LRCH1-205ENST00000463929 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
LRCH1-205ENST00000463929 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
LRCH1-205ENST00000463929 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
LRCH1-205ENST00000463929 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
LRCH1-205ENST00000463929 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
LRCH1-205ENST00000463929 APLP2Q06481 763 aa14.54□□□□□ -0.08
LRCH1-205ENST00000463929 CAPN15O75808 1086 aa14.45□□□□□ -0.1
LRCH1-205ENST00000463929 ATXN8OSP0DMR3 200 aa14.39□□□□□ -0.11
LRCH1-205ENST00000463929 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
LRCH1-205ENST00000463929 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
LRCH1-205ENST00000463929 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
LRCH1-205ENST00000463929 DSG3P32926 999 aa14.32□□□□□ -0.12
LRCH1-205ENST00000463929 ABCB7O75027 752 aa14.17□□□□□ -0.14
LRCH1-205ENST00000463929 POLA2Q14181 598 aa14.09□□□□□ -0.15
LRCH1-205ENST00000463929 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
LRCH1-205ENST00000463929 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
LRCH1-205ENST00000463929 FBLN2P98095 1184 aa13.72□□□□□ -0.21
LRCH1-205ENST00000463929 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
LRCH1-205ENST00000463929 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
LRCH1-205ENST00000463929 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
LRCH1-205ENST00000463929 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
LRCH1-205ENST00000463929 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
LRCH1-205ENST00000463929 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
LRCH1-205ENST00000463929 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
LRCH1-205ENST00000463929 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
LRCH1-205ENST00000463929 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
LRCH1-205ENST00000463929 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
LRCH1-205ENST00000463929 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
LRCH1-205ENST00000463929 PROM2Q8N271 834 aa13.18□□□□□ -0.3
LRCH1-205ENST00000463929 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
LRCH1-205ENST00000463929 FKBP8Q14318 412 aa13.15□□□□□ -0.3
LRCH1-205ENST00000463929 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
LRCH1-205ENST00000463929 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
LRCH1-205ENST00000463929 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
LRCH1-205ENST00000463929 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
LRCH1-205ENST00000463929 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
LRCH1-205ENST00000463929 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
LRCH1-205ENST00000463929 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
LRCH1-205ENST00000463929 POTEHQ6S545 545 aa12.9□□□□□ -0.34
LRCH1-205ENST00000463929 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
LRCH1-205ENST00000463929 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
LRCH1-205ENST00000463929 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
LRCH1-205ENST00000463929 CHADLQ6NUI6 762 aa12.74□□□□□ -0.37
LRCH1-205ENST00000463929 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
LRCH1-205ENST00000463929 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
LRCH1-205ENST00000463929 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
LRCH1-205ENST00000463929 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
LRCH1-205ENST00000463929 MIER1Q8N108 512 aa12.58□□□□□ -0.4
LRCH1-205ENST00000463929 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
LRCH1-205ENST00000463929 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
LRCH1-205ENST00000463929 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
LRCH1-205ENST00000463929 HAX1O00165 279 aa12.49□□□□□ -0.41
LRCH1-205ENST00000463929 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
LRCH1-205ENST00000463929 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
LRCH1-205ENST00000463929 ABCC9O60706 1549 aa12.44□□□□□ -0.42
LRCH1-205ENST00000463929 EVX2Q03828 476 aa12.44□□□□□ -0.42
LRCH1-205ENST00000463929 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
LRCH1-205ENST00000463929 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
LRCH1-205ENST00000463929 NUBP1P53384 320 aa12.38□□□□□ -0.43
LRCH1-205ENST00000463929 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
LRCH1-205ENST00000463929 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
LRCH1-205ENST00000463929 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
LRCH1-205ENST00000463929 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
LRCH1-205ENST00000463929 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
LRCH1-205ENST00000463929 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
LRCH1-205ENST00000463929 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms