RNA–Protein interactions for RNA: ENST00000462405.5

HFM1-206, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 2

Gene HFM1, Length 2,667 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-206ENST00000462405 POTEDQ86YR6 584 aa10□□□□□ -0.81
HFM1-206ENST00000462405 AEBP2Q6ZN18 517 aaPredicted RBP7.77□□□□□ -1.16
HFM1-206ENST00000462405 CHIC1Q5VXU3 224 aa7.73□□□□□ -1.17
HFM1-206ENST00000462405 POTEHQ6S545 545 aa7.54□□□□□ -1.2
HFM1-206ENST00000462405 MSH5O43196 834 aa7.49□□□□□ -1.21
HFM1-206ENST00000462405 SENP3Q9H4L4 574 aaPredicted RBP7.31□□□□□ -1.24
HFM1-206ENST00000462405 CACNB1Q02641 598 aaPredicted RBP7.24□□□□□ -1.25
HFM1-206ENST00000462405 PLSCR2Q9NRY7 297 aa6.81□□□□□ -1.32
HFM1-206ENST00000462405 PHF23Q9BUL5 403 aaPredicted RBP6.77□□□□□ -1.33
HFM1-206ENST00000462405 FOXD1Q16676 465 aa6.68□□□□□ -1.34
HFM1-206ENST00000462405 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
HFM1-206ENST00000462405 SP7Q8TDD2 431 aaPredicted RBP6.27□□□□□ -1.41
HFM1-206ENST00000462405 C1QBPQ07021 282 aaKnown RBP5.99□□□□□ -1.45
HFM1-206ENST00000462405 PIAS4Q8N2W9 510 aaPredicted RBP5.94□□□□□ -1.46
HFM1-206ENST00000462405 RNF39Q9H2S5 420 aa5.87□□□□□ -1.47
HFM1-206ENST00000462405 LHX8Q68G74 356 aa5.81□□□□□ -1.48
HFM1-206ENST00000462405 DMRT2Q9Y5R5 561 aa5.51□□□□□ -1.53
HFM1-206ENST00000462405 POTEMA6NI47 508 aa5.46□□□□□ -1.54
HFM1-206ENST00000462405 POTEGQ6S5H5 508 aa5.37□□□□□ -1.55
HFM1-206ENST00000462405 DNAJC5BQ9UF47 199 aa5.31□□□□□ -1.56
HFM1-206ENST00000462405 CHRDL2Q6WN34 429 aa5.3□□□□□ -1.56
HFM1-206ENST00000462405 SCAF1Q9H7N4 1312 aaKnown RBP5.26□□□□□ -1.57
HFM1-206ENST00000462405 PPP6R1Q9UPN7 881 aa5.15□□□□□ -1.58
HFM1-206ENST00000462405 ADRA2BP18089 450 aa5.14□□□□□ -1.59
HFM1-206ENST00000462405 RBM42Q9BTD8 480 aaKnown RBP5.14□□□□□ -1.59
HFM1-206ENST00000462405 DCAF8L1A6NGE4 600 aa5.13□□□□□ -1.59
HFM1-206ENST00000462405 HAX1O00165 279 aa5.12□□□□□ -1.59
HFM1-206ENST00000462405 PLPPR3Q6T4P5 718 aa4.99□□□□□ -1.61
HFM1-206ENST00000462405 MAPK8IP2Q13387 824 aaPredicted RBP4.95□□□□□ -1.62
HFM1-206ENST00000462405 CLCN6P51797 869 aa4.93□□□□□ -1.62
HFM1-206ENST00000462405 HOXD11P31277 338 aaPredicted RBP4.92□□□□□ -1.62
HFM1-206ENST00000462405 CDAN1Q8IWY9 1227 aa4.89□□□□□ -1.63
HFM1-206ENST00000462405 MMRN1Q13201 1228 aa4.85□□□□□ -1.63
HFM1-206ENST00000462405 DSG3P32926 999 aa4.84□□□□□ -1.63
HFM1-206ENST00000462405 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
HFM1-206ENST00000462405 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
HFM1-206ENST00000462405 GABBR2O75899 941 aa4.71□□□□□ -1.65
HFM1-206ENST00000462405 MAMSTRQ6ZN01 415 aa4.68□□□□□ -1.66
HFM1-206ENST00000462405 PIP4P2Q8N4L2 257 aa4.68□□□□□ -1.66
HFM1-206ENST00000462405 APLP2Q06481 763 aa4.67□□□□□ -1.66
HFM1-206ENST00000462405 SPNS2Q8IVW8 549 aa4.65□□□□□ -1.67
HFM1-206ENST00000462405 RNF216Q9NWF9 866 aaPredicted RBP4.65□□□□□ -1.67
HFM1-206ENST00000462405 OTUD5Q96G74 571 aa4.64□□□□□ -1.67
HFM1-206ENST00000462405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.64□□□□□ -1.67
HFM1-206ENST00000462405 CAPN15O75808 1086 aa4.63□□□□□ -1.67
HFM1-206ENST00000462405 AKT1S1Q96B36 256 aa4.55□□□□□ -1.68
HFM1-206ENST00000462405 FXR2P51116 673 aaKnown RBP eCLIP4.54□□□□□ -1.68
HFM1-206ENST00000462405 C19orf67A6NJJ6 358 aa4.49□□□□□ -1.69
HFM1-206ENST00000462405 XP32Q5T750 250 aa4.49□□□□□ -1.69
HFM1-206ENST00000462405 ZNF219Q9P2Y4 722 aaPredicted RBP4.48□□□□□ -1.69
HFM1-206ENST00000462405 EVX2Q03828 476 aa4.45□□□□□ -1.7
HFM1-206ENST00000462405 FAM163AQ96GL9 167 aaPredicted RBP4.43□□□□□ -1.7
HFM1-206ENST00000462405 CNKSR2Q8WXI2 1034 aa4.42□□□□□ -1.7
HFM1-206ENST00000462405 SPINK5Q9NQ38 1064 aaPredicted RBP4.39□□□□□ -1.71
HFM1-206ENST00000462405 LCE2DQ5TA82 110 aaPredicted RBP4.37□□□□□ -1.71
HFM1-206ENST00000462405 POTEIP0CG38 1075 aa4.35□□□□□ -1.71
HFM1-206ENST00000462405 DCBLD2Q96PD2 775 aa4.34□□□□□ -1.71
HFM1-206ENST00000462405 RGS20O76081 388 aa4.34□□□□□ -1.72
HFM1-206ENST00000462405 REM2Q8IYK8 340 aaPredicted RBP4.32□□□□□ -1.72
HFM1-206ENST00000462405 U3KPZ7 1027 aaPredicted RBP4.28□□□□□ -1.72
HFM1-206ENST00000462405 SCUBE2Q9NQ36 999 aa4.26□□□□□ -1.73
HFM1-206ENST00000462405 ABCB7O75027 752 aa4.25□□□□□ -1.73
HFM1-206ENST00000462405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.24□□□□□ -1.73
HFM1-206ENST00000462405 HNRNPUL2Q1KMD3 747 aaKnown RBP4.24□□□□□ -1.73
HFM1-206ENST00000462405 TRHP20396 242 aaPredicted RBP4.23□□□□□ -1.73
HFM1-206ENST00000462405 PITPNM1O00562 1244 aa4.21□□□□□ -1.73
HFM1-206ENST00000462405 ANO8Q9HCE9 1232 aaPredicted RBP4.19□□□□□ -1.74
HFM1-206ENST00000462405 ZBTB12Q9Y330 459 aaPredicted RBP4.19□□□□□ -1.74
HFM1-206ENST00000462405 TMEM121BQ9BXQ6 578 aaPredicted RBP4.16□□□□□ -1.74
HFM1-206ENST00000462405 BTBD11A6QL63 1104 aa4.15□□□□□ -1.75
HFM1-206ENST00000462405 PRKAR2AP13861 404 aaKnown RBP4.14□□□□□ -1.75
HFM1-206ENST00000462405 PPP4R3CPQ6ZMV5 832 aa4.11□□□□□ -1.75
HFM1-206ENST00000462405 SAMD1Q6SPF0 538 aaPredicted RBP4.06□□□□□ -1.76
HFM1-206ENST00000462405 PTGER2P43116 358 aa4.05□□□□□ -1.76
HFM1-206ENST00000462405 IRX2Q9BZI1 471 aaPredicted RBP4.04□□□□□ -1.76
HFM1-206ENST00000462405 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
HFM1-206ENST00000462405 C7P10643 843 aa4.02□□□□□ -1.77
HFM1-206ENST00000462405 SLC39A7Q92504 469 aa4.01□□□□□ -1.77
HFM1-206ENST00000462405 POTEB2H3BUK9 544 aa4.01□□□□□ -1.77
HFM1-206ENST00000462405 SUZ12Q15022 739 aaKnown RBP4□□□□□ -1.77
HFM1-206ENST00000462405 SPDYE1Q8NFV5 336 aaPredicted RBP3.99□□□□□ -1.77
HFM1-206ENST00000462405 RNF166Q96A37 237 aaPredicted RBP3.99□□□□□ -1.77
HFM1-206ENST00000462405 KRTAP17-1Q9BYP8 105 aa3.98□□□□□ -1.77
HFM1-206ENST00000462405 ZNF579Q8NAF0 562 aaKnown RBP3.98□□□□□ -1.77
HFM1-206ENST00000462405 KRTAP1-3Q8IUG1 177 aa3.97□□□□□ -1.77
HFM1-206ENST00000462405 CD44P16070 742 aaKnown RBP3.97□□□□□ -1.77
HFM1-206ENST00000462405 STK17AQ9UEE5 414 aa3.96□□□□□ -1.78
HFM1-206ENST00000462405 NCBP3Q53F19 620 aaKnown RBP3.94□□□□□ -1.78
HFM1-206ENST00000462405 SNPHO15079 494 aa3.92□□□□□ -1.78
HFM1-206ENST00000462405 POLA2Q14181 598 aa3.9□□□□□ -1.78
HFM1-206ENST00000462405 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
HFM1-206ENST00000462405 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
HFM1-206ENST00000462405 METRNQ9UJH8 293 aa3.87□□□□□ -1.79
HFM1-206ENST00000462405 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
HFM1-206ENST00000462405 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
HFM1-206ENST00000462405 ST18O60284 1047 aa3.84□□□□□ -1.8
HFM1-206ENST00000462405 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
HFM1-206ENST00000462405 LAPTM4AQ15012 233 aa3.82□□□□□ -1.8
HFM1-206ENST00000462405 PSMG3-AS1Q96PY0 264 aa3.81□□□□□ -1.8
HFM1-206ENST00000462405 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms