RNA–Protein interactions for RNA: ENST00000462255.1

PIK3CA-202, Transcript of phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, humanhuman

TSL 3

Gene PIK3CA, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CA-202ENST00000462255 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
PIK3CA-202ENST00000462255 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
PIK3CA-202ENST00000462255 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
PIK3CA-202ENST00000462255 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
PIK3CA-202ENST00000462255 FOXD1Q16676 465 aa19.17■□□□□ 0.66
PIK3CA-202ENST00000462255 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
PIK3CA-202ENST00000462255 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
PIK3CA-202ENST00000462255 ADRA2BP18089 450 aa18.1■□□□□ 0.49
PIK3CA-202ENST00000462255 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
PIK3CA-202ENST00000462255 MSH5O43196 834 aa17.84■□□□□ 0.45
PIK3CA-202ENST00000462255 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
PIK3CA-202ENST00000462255 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
PIK3CA-202ENST00000462255 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
PIK3CA-202ENST00000462255 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
PIK3CA-202ENST00000462255 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
PIK3CA-202ENST00000462255 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
PIK3CA-202ENST00000462255 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
PIK3CA-202ENST00000462255 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
PIK3CA-202ENST00000462255 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
PIK3CA-202ENST00000462255 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
PIK3CA-202ENST00000462255 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
PIK3CA-202ENST00000462255 KCNA4P22459 653 aa15.58■□□□□ 0.08
PIK3CA-202ENST00000462255 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
PIK3CA-202ENST00000462255 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
PIK3CA-202ENST00000462255 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
PIK3CA-202ENST00000462255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
PIK3CA-202ENST00000462255 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
PIK3CA-202ENST00000462255 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
PIK3CA-202ENST00000462255 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
PIK3CA-202ENST00000462255 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
PIK3CA-202ENST00000462255 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
PIK3CA-202ENST00000462255 CAPN15O75808 1086 aa14.56□□□□□ -0.08
PIK3CA-202ENST00000462255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
PIK3CA-202ENST00000462255 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
PIK3CA-202ENST00000462255 APLP2Q06481 763 aa14.47□□□□□ -0.09
PIK3CA-202ENST00000462255 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
PIK3CA-202ENST00000462255 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
PIK3CA-202ENST00000462255 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
PIK3CA-202ENST00000462255 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
PIK3CA-202ENST00000462255 DSG3P32926 999 aa14.36□□□□□ -0.11
PIK3CA-202ENST00000462255 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
PIK3CA-202ENST00000462255 ZBTB22O15209 634 aa14.32□□□□□ -0.12
PIK3CA-202ENST00000462255 ABCB7O75027 752 aa14.26□□□□□ -0.13
PIK3CA-202ENST00000462255 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
PIK3CA-202ENST00000462255 POLA2Q14181 598 aa14.03□□□□□ -0.16
PIK3CA-202ENST00000462255 ATXN8OSP0DMR3 200 aa13.94□□□□□ -0.18
PIK3CA-202ENST00000462255 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
PIK3CA-202ENST00000462255 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
PIK3CA-202ENST00000462255 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
PIK3CA-202ENST00000462255 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
PIK3CA-202ENST00000462255 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
PIK3CA-202ENST00000462255 FBLN2P98095 1184 aa13.56□□□□□ -0.24
PIK3CA-202ENST00000462255 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
PIK3CA-202ENST00000462255 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
PIK3CA-202ENST00000462255 NISCHQ9Y2I1 1504 aa13.44□□□□□ -0.26
PIK3CA-202ENST00000462255 POTEHQ6S545 545 aa13.38□□□□□ -0.27
PIK3CA-202ENST00000462255 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
PIK3CA-202ENST00000462255 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
PIK3CA-202ENST00000462255 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
PIK3CA-202ENST00000462255 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
PIK3CA-202ENST00000462255 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
PIK3CA-202ENST00000462255 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
PIK3CA-202ENST00000462255 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
PIK3CA-202ENST00000462255 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
PIK3CA-202ENST00000462255 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PIK3CA-202ENST00000462255 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
PIK3CA-202ENST00000462255 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
PIK3CA-202ENST00000462255 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
PIK3CA-202ENST00000462255 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
PIK3CA-202ENST00000462255 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
PIK3CA-202ENST00000462255 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
PIK3CA-202ENST00000462255 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
PIK3CA-202ENST00000462255 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
PIK3CA-202ENST00000462255 HAX1O00165 279 aa12.78□□□□□ -0.36
PIK3CA-202ENST00000462255 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
PIK3CA-202ENST00000462255 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
PIK3CA-202ENST00000462255 PROM2Q8N271 834 aa12.64□□□□□ -0.39
PIK3CA-202ENST00000462255 FKBP8Q14318 412 aa12.62□□□□□ -0.39
PIK3CA-202ENST00000462255 EVX2Q03828 476 aa12.6□□□□□ -0.39
PIK3CA-202ENST00000462255 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
PIK3CA-202ENST00000462255 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
PIK3CA-202ENST00000462255 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
PIK3CA-202ENST00000462255 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
PIK3CA-202ENST00000462255 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
PIK3CA-202ENST00000462255 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
PIK3CA-202ENST00000462255 MIER1Q8N108 512 aa12.37□□□□□ -0.43
PIK3CA-202ENST00000462255 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
PIK3CA-202ENST00000462255 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
PIK3CA-202ENST00000462255 GABBR2O75899 941 aa12.33□□□□□ -0.44
PIK3CA-202ENST00000462255 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
PIK3CA-202ENST00000462255 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
PIK3CA-202ENST00000462255 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
PIK3CA-202ENST00000462255 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
PIK3CA-202ENST00000462255 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
PIK3CA-202ENST00000462255 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
PIK3CA-202ENST00000462255 CLCN6P51797 869 aa12.18□□□□□ -0.46
PIK3CA-202ENST00000462255 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
PIK3CA-202ENST00000462255 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
PIK3CA-202ENST00000462255 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
PIK3CA-202ENST00000462255 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms