RNA–Protein interactions for RNA: ENST00000460503.5

NMD3-203, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 4

Gene NMD3, Length 547 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-203ENST00000460503 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
NMD3-203ENST00000460503 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
NMD3-203ENST00000460503 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
NMD3-203ENST00000460503 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
NMD3-203ENST00000460503 FOXD1Q16676 465 aa22.56■■□□□ 1.2
NMD3-203ENST00000460503 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
NMD3-203ENST00000460503 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
NMD3-203ENST00000460503 ADRA2BP18089 450 aa21.6■■□□□ 1.05
NMD3-203ENST00000460503 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
NMD3-203ENST00000460503 MSH5O43196 834 aa20.84■□□□□ 0.93
NMD3-203ENST00000460503 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
NMD3-203ENST00000460503 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
NMD3-203ENST00000460503 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
NMD3-203ENST00000460503 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
NMD3-203ENST00000460503 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
NMD3-203ENST00000460503 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
NMD3-203ENST00000460503 KCNA4P22459 653 aa19.28■□□□□ 0.68
NMD3-203ENST00000460503 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
NMD3-203ENST00000460503 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
NMD3-203ENST00000460503 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
NMD3-203ENST00000460503 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
NMD3-203ENST00000460503 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
NMD3-203ENST00000460503 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
NMD3-203ENST00000460503 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
NMD3-203ENST00000460503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
NMD3-203ENST00000460503 SLC4A2P04920 1241 aa18■□□□□ 0.47
NMD3-203ENST00000460503 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
NMD3-203ENST00000460503 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
NMD3-203ENST00000460503 ZBTB22O15209 634 aa17.74■□□□□ 0.43
NMD3-203ENST00000460503 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
NMD3-203ENST00000460503 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
NMD3-203ENST00000460503 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
NMD3-203ENST00000460503 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
NMD3-203ENST00000460503 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
NMD3-203ENST00000460503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
NMD3-203ENST00000460503 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
NMD3-203ENST00000460503 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
NMD3-203ENST00000460503 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
NMD3-203ENST00000460503 APLP2Q06481 763 aa17.3■□□□□ 0.36
NMD3-203ENST00000460503 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
NMD3-203ENST00000460503 CAPN15O75808 1086 aa17.2■□□□□ 0.34
NMD3-203ENST00000460503 ATXN8OSP0DMR3 200 aa17.16■□□□□ 0.34
NMD3-203ENST00000460503 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
NMD3-203ENST00000460503 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
NMD3-203ENST00000460503 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
NMD3-203ENST00000460503 DSG3P32926 999 aa16.95■□□□□ 0.3
NMD3-203ENST00000460503 ABCB7O75027 752 aa16.88■□□□□ 0.29
NMD3-203ENST00000460503 POLA2Q14181 598 aa16.81■□□□□ 0.28
NMD3-203ENST00000460503 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
NMD3-203ENST00000460503 FBLN2P98095 1184 aa16.4■□□□□ 0.22
NMD3-203ENST00000460503 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
NMD3-203ENST00000460503 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
NMD3-203ENST00000460503 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
NMD3-203ENST00000460503 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
NMD3-203ENST00000460503 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
NMD3-203ENST00000460503 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
NMD3-203ENST00000460503 DNAJC5Q9H3Z4 198 aa16.02■□□□□ 0.16
NMD3-203ENST00000460503 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
NMD3-203ENST00000460503 ABCC9O60706 1549 aa15.98■□□□□ 0.15
NMD3-203ENST00000460503 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
NMD3-203ENST00000460503 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
NMD3-203ENST00000460503 SSUH2Q9Y2M2 353 aa15.93■□□□□ 0.14
NMD3-203ENST00000460503 FKBP8Q14318 412 aa15.86■□□□□ 0.13
NMD3-203ENST00000460503 REM2Q8IYK8 340 aaPredicted RBP15.78■□□□□ 0.12
NMD3-203ENST00000460503 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
NMD3-203ENST00000460503 PROM2Q8N271 834 aa15.67■□□□□ 0.1
NMD3-203ENST00000460503 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
NMD3-203ENST00000460503 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
NMD3-203ENST00000460503 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
NMD3-203ENST00000460503 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
NMD3-203ENST00000460503 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
NMD3-203ENST00000460503 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
NMD3-203ENST00000460503 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
NMD3-203ENST00000460503 FXR2P51116 673 aaKnown RBP eCLIP15.33■□□□□ 0.04
NMD3-203ENST00000460503 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
NMD3-203ENST00000460503 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
NMD3-203ENST00000460503 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
NMD3-203ENST00000460503 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
NMD3-203ENST00000460503 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
NMD3-203ENST00000460503 POTEHQ6S545 545 aa15.16■□□□□ 0.02
NMD3-203ENST00000460503 MIER1Q8N108 512 aa15.14■□□□□ 0.01
NMD3-203ENST00000460503 VASPP50552 380 aaPredicted RBP15.12■□□□□ 0.01
NMD3-203ENST00000460503 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
NMD3-203ENST00000460503 PLEKHG5O94827 1062 aa15.05■□□□□ -0
NMD3-203ENST00000460503 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
NMD3-203ENST00000460503 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
NMD3-203ENST00000460503 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
NMD3-203ENST00000460503 IFNLR1Q8IU57 520 aaPredicted RBP14.92□□□□□ -0.02
NMD3-203ENST00000460503 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
NMD3-203ENST00000460503 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
NMD3-203ENST00000460503 HAX1O00165 279 aa14.84□□□□□ -0.03
NMD3-203ENST00000460503 C19orf67A6NJJ6 358 aa14.81□□□□□ -0.04
NMD3-203ENST00000460503 NUBP1P53384 320 aa14.77□□□□□ -0.05
NMD3-203ENST00000460503 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
NMD3-203ENST00000460503 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
NMD3-203ENST00000460503 EVX2Q03828 476 aa14.73□□□□□ -0.05
NMD3-203ENST00000460503 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
NMD3-203ENST00000460503 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
NMD3-203ENST00000460503 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
NMD3-203ENST00000460503 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms