RNA–Protein interactions for RNA: ENST00000460190.1

LCP1-205, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 2

Gene LCP1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-205ENST00000460190 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
LCP1-205ENST00000460190 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
LCP1-205ENST00000460190 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
LCP1-205ENST00000460190 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
LCP1-205ENST00000460190 FOXD1Q16676 465 aa19.4■□□□□ 0.7
LCP1-205ENST00000460190 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
LCP1-205ENST00000460190 MSH5O43196 834 aa18.27■□□□□ 0.52
LCP1-205ENST00000460190 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
LCP1-205ENST00000460190 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LCP1-205ENST00000460190 ADRA2BP18089 450 aa17.61■□□□□ 0.41
LCP1-205ENST00000460190 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
LCP1-205ENST00000460190 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
LCP1-205ENST00000460190 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
LCP1-205ENST00000460190 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
LCP1-205ENST00000460190 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
LCP1-205ENST00000460190 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
LCP1-205ENST00000460190 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
LCP1-205ENST00000460190 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
LCP1-205ENST00000460190 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
LCP1-205ENST00000460190 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
LCP1-205ENST00000460190 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
LCP1-205ENST00000460190 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
LCP1-205ENST00000460190 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
LCP1-205ENST00000460190 POTEHQ6S545 545 aa14.72□□□□□ -0.05
LCP1-205ENST00000460190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
LCP1-205ENST00000460190 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
LCP1-205ENST00000460190 DSG3P32926 999 aa14.42□□□□□ -0.1
LCP1-205ENST00000460190 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
LCP1-205ENST00000460190 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
LCP1-205ENST00000460190 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
LCP1-205ENST00000460190 CAPN15O75808 1086 aa14.32□□□□□ -0.12
LCP1-205ENST00000460190 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
LCP1-205ENST00000460190 ABCB7O75027 752 aa13.99□□□□□ -0.17
LCP1-205ENST00000460190 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
LCP1-205ENST00000460190 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
LCP1-205ENST00000460190 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
LCP1-205ENST00000460190 APLP2Q06481 763 aa13.74□□□□□ -0.21
LCP1-205ENST00000460190 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
LCP1-205ENST00000460190 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
LCP1-205ENST00000460190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
LCP1-205ENST00000460190 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
LCP1-205ENST00000460190 KCNA4P22459 653 aa13.58□□□□□ -0.24
LCP1-205ENST00000460190 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
LCP1-205ENST00000460190 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
LCP1-205ENST00000460190 POLA2Q14181 598 aa13.47□□□□□ -0.25
LCP1-205ENST00000460190 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
LCP1-205ENST00000460190 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
LCP1-205ENST00000460190 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
LCP1-205ENST00000460190 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
LCP1-205ENST00000460190 HAX1O00165 279 aa13.17□□□□□ -0.3
LCP1-205ENST00000460190 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
LCP1-205ENST00000460190 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
LCP1-205ENST00000460190 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.325e-9■■■□□ 18.5
LCP1-205ENST00000460190 EVX2Q03828 476 aa13.06□□□□□ -0.32
LCP1-205ENST00000460190 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
LCP1-205ENST00000460190 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
LCP1-205ENST00000460190 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
LCP1-205ENST00000460190 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
LCP1-205ENST00000460190 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
LCP1-205ENST00000460190 LHX8Q68G74 356 aa12.67□□□□□ -0.38
LCP1-205ENST00000460190 GABBR2O75899 941 aa12.66□□□□□ -0.38
LCP1-205ENST00000460190 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
LCP1-205ENST00000460190 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
LCP1-205ENST00000460190 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
LCP1-205ENST00000460190 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
LCP1-205ENST00000460190 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
LCP1-205ENST00000460190 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
LCP1-205ENST00000460190 ZBTB22O15209 634 aa12.52□□□□□ -0.41
LCP1-205ENST00000460190 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
LCP1-205ENST00000460190 FBLN2P98095 1184 aa12.48□□□□□ -0.41
LCP1-205ENST00000460190 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
LCP1-205ENST00000460190 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
LCP1-205ENST00000460190 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
LCP1-205ENST00000460190 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
LCP1-205ENST00000460190 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
LCP1-205ENST00000460190 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
LCP1-205ENST00000460190 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
LCP1-205ENST00000460190 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
LCP1-205ENST00000460190 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
LCP1-205ENST00000460190 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
LCP1-205ENST00000460190 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
LCP1-205ENST00000460190 ABCC9O60706 1549 aa12.19□□□□□ -0.46
LCP1-205ENST00000460190 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
LCP1-205ENST00000460190 CLCN6P51797 869 aa12.11□□□□□ -0.47
LCP1-205ENST00000460190 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
LCP1-205ENST00000460190 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
LCP1-205ENST00000460190 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
LCP1-205ENST00000460190 ZRANB1Q9UGI0 708 aa12□□□□□ -0.49
LCP1-205ENST00000460190 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
LCP1-205ENST00000460190 POTEMA6NI47 508 aa11.95□□□□□ -0.5
LCP1-205ENST00000460190 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
LCP1-205ENST00000460190 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
LCP1-205ENST00000460190 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
LCP1-205ENST00000460190 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
LCP1-205ENST00000460190 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
LCP1-205ENST00000460190 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
LCP1-205ENST00000460190 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
LCP1-205ENST00000460190 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
LCP1-205ENST00000460190 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
LCP1-205ENST00000460190 LCE2DQ5TA82 110 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms