RNA–Protein interactions for RNA: ENST00000460104.1

PLS1-203, Transcript of plastin 1, humanhuman

TSL 4

Gene PLS1, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-203ENST00000460104 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
PLS1-203ENST00000460104 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
PLS1-203ENST00000460104 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
PLS1-203ENST00000460104 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
PLS1-203ENST00000460104 FOXD1Q16676 465 aa19.46■□□□□ 0.71
PLS1-203ENST00000460104 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
PLS1-203ENST00000460104 MSH5O43196 834 aa18.39■□□□□ 0.53
PLS1-203ENST00000460104 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
PLS1-203ENST00000460104 ADRA2BP18089 450 aa18.16■□□□□ 0.5
PLS1-203ENST00000460104 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
PLS1-203ENST00000460104 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
PLS1-203ENST00000460104 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
PLS1-203ENST00000460104 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
PLS1-203ENST00000460104 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
PLS1-203ENST00000460104 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
PLS1-203ENST00000460104 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
PLS1-203ENST00000460104 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
PLS1-203ENST00000460104 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
PLS1-203ENST00000460104 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
PLS1-203ENST00000460104 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
PLS1-203ENST00000460104 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
PLS1-203ENST00000460104 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
PLS1-203ENST00000460104 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
PLS1-203ENST00000460104 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
PLS1-203ENST00000460104 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
PLS1-203ENST00000460104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
PLS1-203ENST00000460104 KCNA4P22459 653 aa15.14■□□□□ 0.01
PLS1-203ENST00000460104 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
PLS1-203ENST00000460104 CAPN15O75808 1086 aa14.84□□□□□ -0.03
PLS1-203ENST00000460104 APLP2Q06481 763 aa14.79□□□□□ -0.04
PLS1-203ENST00000460104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
PLS1-203ENST00000460104 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.05
PLS1-203ENST00000460104 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
PLS1-203ENST00000460104 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
PLS1-203ENST00000460104 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
PLS1-203ENST00000460104 DSG3P32926 999 aa14.58□□□□□ -0.08
PLS1-203ENST00000460104 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
PLS1-203ENST00000460104 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
PLS1-203ENST00000460104 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
PLS1-203ENST00000460104 ABCB7O75027 752 aa14.41□□□□□ -0.1
PLS1-203ENST00000460104 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
PLS1-203ENST00000460104 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
PLS1-203ENST00000460104 POLA2Q14181 598 aa14.13□□□□□ -0.15
PLS1-203ENST00000460104 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
PLS1-203ENST00000460104 POTEHQ6S545 545 aa14.02□□□□□ -0.17
PLS1-203ENST00000460104 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
PLS1-203ENST00000460104 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
PLS1-203ENST00000460104 ZBTB22O15209 634 aa13.81□□□□□ -0.2
PLS1-203ENST00000460104 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
PLS1-203ENST00000460104 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
PLS1-203ENST00000460104 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
PLS1-203ENST00000460104 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
PLS1-203ENST00000460104 FBLN2P98095 1184 aa13.64□□□□□ -0.23
PLS1-203ENST00000460104 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
PLS1-203ENST00000460104 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
PLS1-203ENST00000460104 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
PLS1-203ENST00000460104 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
PLS1-203ENST00000460104 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
PLS1-203ENST00000460104 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
PLS1-203ENST00000460104 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
PLS1-203ENST00000460104 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
PLS1-203ENST00000460104 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
PLS1-203ENST00000460104 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
PLS1-203ENST00000460104 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
PLS1-203ENST00000460104 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
PLS1-203ENST00000460104 HAX1O00165 279 aa13.22□□□□□ -0.29
PLS1-203ENST00000460104 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
PLS1-203ENST00000460104 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
PLS1-203ENST00000460104 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
PLS1-203ENST00000460104 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
PLS1-203ENST00000460104 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PLS1-203ENST00000460104 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
PLS1-203ENST00000460104 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
PLS1-203ENST00000460104 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
PLS1-203ENST00000460104 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
PLS1-203ENST00000460104 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
PLS1-203ENST00000460104 EVX2Q03828 476 aa12.79□□□□□ -0.36
PLS1-203ENST00000460104 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
PLS1-203ENST00000460104 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
PLS1-203ENST00000460104 GABBR2O75899 941 aa12.63□□□□□ -0.39
PLS1-203ENST00000460104 CLCN6P51797 869 aa12.59□□□□□ -0.39
PLS1-203ENST00000460104 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
PLS1-203ENST00000460104 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
PLS1-203ENST00000460104 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
PLS1-203ENST00000460104 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
PLS1-203ENST00000460104 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
PLS1-203ENST00000460104 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
PLS1-203ENST00000460104 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
PLS1-203ENST00000460104 LHX8Q68G74 356 aa12.36□□□□□ -0.43
PLS1-203ENST00000460104 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
PLS1-203ENST00000460104 MIER1Q8N108 512 aa12.31□□□□□ -0.44
PLS1-203ENST00000460104 PROM2Q8N271 834 aa12.29□□□□□ -0.44
PLS1-203ENST00000460104 PHF12Q96QT6 1004 aa12.25□□□□□ -0.45
PLS1-203ENST00000460104 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
PLS1-203ENST00000460104 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
PLS1-203ENST00000460104 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
PLS1-203ENST00000460104 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
PLS1-203ENST00000460104 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
PLS1-203ENST00000460104 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
PLS1-203ENST00000460104 FKBP8Q14318 412 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms