RNA–Protein interactions for RNA: ENST00000456489.1

ITSN1-221, Transcript of intersectin 1, humanhuman

TSL 2

Gene ITSN1, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-221ENST00000456489 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
ITSN1-221ENST00000456489 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
ITSN1-221ENST00000456489 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
ITSN1-221ENST00000456489 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-221ENST00000456489 FOXD1Q16676 465 aa17.32■□□□□ 0.36
ITSN1-221ENST00000456489 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
ITSN1-221ENST00000456489 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
ITSN1-221ENST00000456489 ADRA2BP18089 450 aa16.52■□□□□ 0.24
ITSN1-221ENST00000456489 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
ITSN1-221ENST00000456489 MSH5O43196 834 aa16■□□□□ 0.15
ITSN1-221ENST00000456489 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
ITSN1-221ENST00000456489 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
ITSN1-221ENST00000456489 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
ITSN1-221ENST00000456489 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
ITSN1-221ENST00000456489 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
ITSN1-221ENST00000456489 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
ITSN1-221ENST00000456489 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
ITSN1-221ENST00000456489 KCNA4P22459 653 aa14.57□□□□□ -0.08
ITSN1-221ENST00000456489 RNF216Q9NWF9 866 aaPredicted RBP14.46□□□□□ -0.09
ITSN1-221ENST00000456489 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
ITSN1-221ENST00000456489 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
ITSN1-221ENST00000456489 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
ITSN1-221ENST00000456489 DNAJC5BQ9UF47 199 aa13.99□□□□□ -0.17
ITSN1-221ENST00000456489 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
ITSN1-221ENST00000456489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.23e-9■■■■■ 30.3
ITSN1-221ENST00000456489 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
ITSN1-221ENST00000456489 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
ITSN1-221ENST00000456489 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-221ENST00000456489 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
ITSN1-221ENST00000456489 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
ITSN1-221ENST00000456489 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
ITSN1-221ENST00000456489 ZBTB22O15209 634 aa13.41□□□□□ -0.26
ITSN1-221ENST00000456489 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
ITSN1-221ENST00000456489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-221ENST00000456489 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
ITSN1-221ENST00000456489 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
ITSN1-221ENST00000456489 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-221ENST00000456489 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-221ENST00000456489 CAPN15O75808 1086 aa13.19□□□□□ -0.3
ITSN1-221ENST00000456489 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
ITSN1-221ENST00000456489 APLP2Q06481 763 aa13.17□□□□□ -0.3
ITSN1-221ENST00000456489 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-221ENST00000456489 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-221ENST00000456489 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-221ENST00000456489 DSG3P32926 999 aa12.99□□□□□ -0.33
ITSN1-221ENST00000456489 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
ITSN1-221ENST00000456489 ABCB7O75027 752 aa12.93□□□□□ -0.34
ITSN1-221ENST00000456489 POLA2Q14181 598 aa12.83□□□□□ -0.36
ITSN1-221ENST00000456489 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
ITSN1-221ENST00000456489 FBLN2P98095 1184 aa12.46□□□□□ -0.41
ITSN1-221ENST00000456489 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
ITSN1-221ENST00000456489 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
ITSN1-221ENST00000456489 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
ITSN1-221ENST00000456489 NISCHQ9Y2I1 1504 aa12.25□□□□□ -0.45
ITSN1-221ENST00000456489 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
ITSN1-221ENST00000456489 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
ITSN1-221ENST00000456489 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
ITSN1-221ENST00000456489 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
ITSN1-221ENST00000456489 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
ITSN1-221ENST00000456489 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
ITSN1-221ENST00000456489 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
ITSN1-221ENST00000456489 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
ITSN1-221ENST00000456489 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
ITSN1-221ENST00000456489 POTEHQ6S545 545 aa11.99□□□□□ -0.49
ITSN1-221ENST00000456489 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
ITSN1-221ENST00000456489 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
ITSN1-221ENST00000456489 FKBP8Q14318 412 aa11.93□□□□□ -0.5
ITSN1-221ENST00000456489 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
ITSN1-221ENST00000456489 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
ITSN1-221ENST00000456489 PROM2Q8N271 834 aa11.82□□□□□ -0.52
ITSN1-221ENST00000456489 PIP4P2Q8N4L2 257 aa11.76□□□□□ -0.53
ITSN1-221ENST00000456489 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
ITSN1-221ENST00000456489 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
ITSN1-221ENST00000456489 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
ITSN1-221ENST00000456489 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
ITSN1-221ENST00000456489 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
ITSN1-221ENST00000456489 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
ITSN1-221ENST00000456489 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
ITSN1-221ENST00000456489 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
ITSN1-221ENST00000456489 MIER1Q8N108 512 aa11.47□□□□□ -0.57
ITSN1-221ENST00000456489 HAX1O00165 279 aa11.44□□□□□ -0.58
ITSN1-221ENST00000456489 ABCC9O60706 1549 aa11.44□□□□□ -0.58
ITSN1-221ENST00000456489 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
ITSN1-221ENST00000456489 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
ITSN1-221ENST00000456489 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
ITSN1-221ENST00000456489 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
ITSN1-221ENST00000456489 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
ITSN1-221ENST00000456489 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
ITSN1-221ENST00000456489 EVX2Q03828 476 aa11.34□□□□□ -0.59
ITSN1-221ENST00000456489 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
ITSN1-221ENST00000456489 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
ITSN1-221ENST00000456489 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
ITSN1-221ENST00000456489 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
ITSN1-221ENST00000456489 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
ITSN1-221ENST00000456489 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
ITSN1-221ENST00000456489 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
ITSN1-221ENST00000456489 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
ITSN1-221ENST00000456489 NUBP1P53384 320 aa11.19□□□□□ -0.62
ITSN1-221ENST00000456489 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
ITSN1-221ENST00000456489 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms