RNA–Protein interactions for RNA: ENST00000454740.5

RC3H2-206, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-206ENST00000454740 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
RC3H2-206ENST00000454740 CHIC1Q5VXU3 224 aa29.83■■■□□ 2.37
RC3H2-206ENST00000454740 SENP3Q9H4L4 574 aaPredicted RBP26.48■■□□□ 1.83
RC3H2-206ENST00000454740 PHF23Q9BUL5 403 aaPredicted RBP26.23■■□□□ 1.79
RC3H2-206ENST00000454740 FOXD1Q16676 465 aa24.72■■□□□ 1.55
RC3H2-206ENST00000454740 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
RC3H2-206ENST00000454740 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
RC3H2-206ENST00000454740 ADRA2BP18089 450 aa23.28■■□□□ 1.32
RC3H2-206ENST00000454740 PIAS4Q8N2W9 510 aaPredicted RBP23.13■■□□□ 1.29
RC3H2-206ENST00000454740 MSH5O43196 834 aa22.95■■□□□ 1.26
RC3H2-206ENST00000454740 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
RC3H2-206ENST00000454740 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
RC3H2-206ENST00000454740 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
RC3H2-206ENST00000454740 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
RC3H2-206ENST00000454740 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
RC3H2-206ENST00000454740 CNKSR2Q8WXI2 1034 aa20.56■□□□□ 0.88
RC3H2-206ENST00000454740 HOXD11P31277 338 aaPredicted RBP20.4■□□□□ 0.86
RC3H2-206ENST00000454740 KCNA4P22459 653 aa20.31■□□□□ 0.84
RC3H2-206ENST00000454740 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
RC3H2-206ENST00000454740 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
RC3H2-206ENST00000454740 DCAF8L1A6NGE4 600 aa20.2■□□□□ 0.82
RC3H2-206ENST00000454740 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
RC3H2-206ENST00000454740 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
RC3H2-206ENST00000454740 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
RC3H2-206ENST00000454740 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
RC3H2-206ENST00000454740 CACNB1Q02641 598 aaPredicted RBP19.57■□□□□ 0.72
RC3H2-206ENST00000454740 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
RC3H2-206ENST00000454740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
RC3H2-206ENST00000454740 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
RC3H2-206ENST00000454740 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
RC3H2-206ENST00000454740 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
RC3H2-206ENST00000454740 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
RC3H2-206ENST00000454740 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
RC3H2-206ENST00000454740 CAPN15O75808 1086 aa18.66■□□□□ 0.58
RC3H2-206ENST00000454740 ZBTB22O15209 634 aa18.64■□□□□ 0.57
RC3H2-206ENST00000454740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
RC3H2-206ENST00000454740 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
RC3H2-206ENST00000454740 DSG3P32926 999 aa18.5■□□□□ 0.55
RC3H2-206ENST00000454740 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
RC3H2-206ENST00000454740 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
RC3H2-206ENST00000454740 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
RC3H2-206ENST00000454740 APLP2Q06481 763 aa18.47■□□□□ 0.55
RC3H2-206ENST00000454740 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
RC3H2-206ENST00000454740 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
RC3H2-206ENST00000454740 ABCB7O75027 752 aa18.29■□□□□ 0.52
RC3H2-206ENST00000454740 ATF5Q9Y2D1 282 aaPredicted RBP18.12■□□□□ 0.49
RC3H2-206ENST00000454740 POLA2Q14181 598 aa18.02■□□□□ 0.48
RC3H2-206ENST00000454740 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
RC3H2-206ENST00000454740 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
RC3H2-206ENST00000454740 ZBTB12Q9Y330 459 aaPredicted RBP17.58■□□□□ 0.4
RC3H2-206ENST00000454740 FKBP8Q14318 412 aa17.45■□□□□ 0.38
RC3H2-206ENST00000454740 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
RC3H2-206ENST00000454740 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
RC3H2-206ENST00000454740 RTN4Q9NQC3 1192 aaKnown RBP17.35■□□□□ 0.37
RC3H2-206ENST00000454740 FBLN2P98095 1184 aa17.29■□□□□ 0.36
RC3H2-206ENST00000454740 POTEHQ6S545 545 aa17.29■□□□□ 0.36
RC3H2-206ENST00000454740 MKRN4PQ13434 485 aaPredicted RBP17.28■□□□□ 0.36
RC3H2-206ENST00000454740 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
RC3H2-206ENST00000454740 CHRDL2Q6WN34 429 aa17.15■□□□□ 0.34
RC3H2-206ENST00000454740 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
RC3H2-206ENST00000454740 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
RC3H2-206ENST00000454740 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
RC3H2-206ENST00000454740 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
RC3H2-206ENST00000454740 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
RC3H2-206ENST00000454740 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
RC3H2-206ENST00000454740 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
RC3H2-206ENST00000454740 SSUH2Q9Y2M2 353 aa16.93■□□□□ 0.3
RC3H2-206ENST00000454740 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
RC3H2-206ENST00000454740 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
RC3H2-206ENST00000454740 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
RC3H2-206ENST00000454740 SPDYE1Q8NFV5 336 aaPredicted RBP16.73■□□□□ 0.27
RC3H2-206ENST00000454740 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
RC3H2-206ENST00000454740 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
RC3H2-206ENST00000454740 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
RC3H2-206ENST00000454740 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
RC3H2-206ENST00000454740 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
RC3H2-206ENST00000454740 HAX1O00165 279 aa16.43■□□□□ 0.22
RC3H2-206ENST00000454740 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
RC3H2-206ENST00000454740 PROM2Q8N271 834 aa16.38■□□□□ 0.21
RC3H2-206ENST00000454740 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
RC3H2-206ENST00000454740 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
RC3H2-206ENST00000454740 EVX2Q03828 476 aa16.31■□□□□ 0.2
RC3H2-206ENST00000454740 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
RC3H2-206ENST00000454740 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
RC3H2-206ENST00000454740 FARP1Q9Y4F1 1045 aaPredicted RBP16.17■□□□□ 0.18
RC3H2-206ENST00000454740 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
RC3H2-206ENST00000454740 IFNLR1Q8IU57 520 aaPredicted RBP16.15■□□□□ 0.18
RC3H2-206ENST00000454740 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
RC3H2-206ENST00000454740 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
RC3H2-206ENST00000454740 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
RC3H2-206ENST00000454740 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
RC3H2-206ENST00000454740 MNX1P50219 401 aaPredicted RBP15.93■□□□□ 0.14
RC3H2-206ENST00000454740 PKD2Q13563 968 aa15.92■□□□□ 0.14
RC3H2-206ENST00000454740 GABBR2O75899 941 aa15.91■□□□□ 0.14
RC3H2-206ENST00000454740 SPOCK2Q92563 424 aa15.89■□□□□ 0.13
RC3H2-206ENST00000454740 HAP1P54257 671 aaPredicted RBP15.88■□□□□ 0.13
RC3H2-206ENST00000454740 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
RC3H2-206ENST00000454740 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
RC3H2-206ENST00000454740 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
RC3H2-206ENST00000454740 MIER1Q8N108 512 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms