RNA–Protein interactions for RNA: ENST00000441739.1

CTTNBP2NL-202, Transcript of CTTNBP2 N-terminal like, humanhuman

TSL 3

Gene CTTNBP2NL, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-202ENST00000441739 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
CTTNBP2NL-202ENST00000441739 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
CTTNBP2NL-202ENST00000441739 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
CTTNBP2NL-202ENST00000441739 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
CTTNBP2NL-202ENST00000441739 FOXD1Q16676 465 aa20.5■□□□□ 0.87
CTTNBP2NL-202ENST00000441739 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
CTTNBP2NL-202ENST00000441739 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
CTTNBP2NL-202ENST00000441739 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
CTTNBP2NL-202ENST00000441739 MSH5O43196 834 aa19.17■□□□□ 0.66
CTTNBP2NL-202ENST00000441739 ADRA2BP18089 450 aa19.14■□□□□ 0.65
CTTNBP2NL-202ENST00000441739 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
CTTNBP2NL-202ENST00000441739 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
CTTNBP2NL-202ENST00000441739 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
CTTNBP2NL-202ENST00000441739 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
CTTNBP2NL-202ENST00000441739 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
CTTNBP2NL-202ENST00000441739 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
CTTNBP2NL-202ENST00000441739 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
CTTNBP2NL-202ENST00000441739 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
CTTNBP2NL-202ENST00000441739 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
CTTNBP2NL-202ENST00000441739 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
CTTNBP2NL-202ENST00000441739 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
CTTNBP2NL-202ENST00000441739 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
CTTNBP2NL-202ENST00000441739 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
CTTNBP2NL-202ENST00000441739 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
CTTNBP2NL-202ENST00000441739 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
CTTNBP2NL-202ENST00000441739 KCNA4P22459 653 aa16.05■□□□□ 0.16
CTTNBP2NL-202ENST00000441739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
CTTNBP2NL-202ENST00000441739 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
CTTNBP2NL-202ENST00000441739 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
CTTNBP2NL-202ENST00000441739 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
CTTNBP2NL-202ENST00000441739 CAPN15O75808 1086 aa15.44■□□□□ 0.06
CTTNBP2NL-202ENST00000441739 DSG3P32926 999 aa15.33■□□□□ 0.04
CTTNBP2NL-202ENST00000441739 APLP2Q06481 763 aa15.27■□□□□ 0.04
CTTNBP2NL-202ENST00000441739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
CTTNBP2NL-202ENST00000441739 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
CTTNBP2NL-202ENST00000441739 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
CTTNBP2NL-202ENST00000441739 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
CTTNBP2NL-202ENST00000441739 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
CTTNBP2NL-202ENST00000441739 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
CTTNBP2NL-202ENST00000441739 ABCB7O75027 752 aa15.11■□□□□ 0.01
CTTNBP2NL-202ENST00000441739 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
CTTNBP2NL-202ENST00000441739 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
CTTNBP2NL-202ENST00000441739 POLA2Q14181 598 aa14.79□□□□□ -0.04
CTTNBP2NL-202ENST00000441739 ZBTB22O15209 634 aa14.77□□□□□ -0.05
CTTNBP2NL-202ENST00000441739 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
CTTNBP2NL-202ENST00000441739 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
CTTNBP2NL-202ENST00000441739 POTEHQ6S545 545 aa14.63□□□□□ -0.07
CTTNBP2NL-202ENST00000441739 ZBTB12Q9Y330 459 aaPredicted RBP14.51□□□□□ -0.09
CTTNBP2NL-202ENST00000441739 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
CTTNBP2NL-202ENST00000441739 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
CTTNBP2NL-202ENST00000441739 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
CTTNBP2NL-202ENST00000441739 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CTTNBP2NL-202ENST00000441739 FBLN2P98095 1184 aa14.17□□□□□ -0.14
CTTNBP2NL-202ENST00000441739 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
CTTNBP2NL-202ENST00000441739 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
CTTNBP2NL-202ENST00000441739 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
CTTNBP2NL-202ENST00000441739 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
CTTNBP2NL-202ENST00000441739 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
CTTNBP2NL-202ENST00000441739 SPDYE2Q495Y8 402 aa14.07□□□□□ -0.16
CTTNBP2NL-202ENST00000441739 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
CTTNBP2NL-202ENST00000441739 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
CTTNBP2NL-202ENST00000441739 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
CTTNBP2NL-202ENST00000441739 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
CTTNBP2NL-202ENST00000441739 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
CTTNBP2NL-202ENST00000441739 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
CTTNBP2NL-202ENST00000441739 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
CTTNBP2NL-202ENST00000441739 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
CTTNBP2NL-202ENST00000441739 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
CTTNBP2NL-202ENST00000441739 HAX1O00165 279 aa13.7□□□□□ -0.22
CTTNBP2NL-202ENST00000441739 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
CTTNBP2NL-202ENST00000441739 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
CTTNBP2NL-202ENST00000441739 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CTTNBP2NL-202ENST00000441739 EVX2Q03828 476 aa13.53□□□□□ -0.24
CTTNBP2NL-202ENST00000441739 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
CTTNBP2NL-202ENST00000441739 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
CTTNBP2NL-202ENST00000441739 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
CTTNBP2NL-202ENST00000441739 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CTTNBP2NL-202ENST00000441739 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
CTTNBP2NL-202ENST00000441739 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
CTTNBP2NL-202ENST00000441739 GABBR2O75899 941 aa13.23□□□□□ -0.29
CTTNBP2NL-202ENST00000441739 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
CTTNBP2NL-202ENST00000441739 PROM2Q8N271 834 aa13.11□□□□□ -0.31
CTTNBP2NL-202ENST00000441739 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
CTTNBP2NL-202ENST00000441739 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
CTTNBP2NL-202ENST00000441739 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CTTNBP2NL-202ENST00000441739 CLCN6P51797 869 aa13.01□□□□□ -0.33
CTTNBP2NL-202ENST00000441739 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
CTTNBP2NL-202ENST00000441739 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
CTTNBP2NL-202ENST00000441739 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
CTTNBP2NL-202ENST00000441739 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
CTTNBP2NL-202ENST00000441739 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
CTTNBP2NL-202ENST00000441739 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
CTTNBP2NL-202ENST00000441739 LHX8Q68G74 356 aa12.87□□□□□ -0.35
CTTNBP2NL-202ENST00000441739 FKBP8Q14318 412 aa12.81□□□□□ -0.36
CTTNBP2NL-202ENST00000441739 MIER1Q8N108 512 aa12.79□□□□□ -0.36
CTTNBP2NL-202ENST00000441739 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
CTTNBP2NL-202ENST00000441739 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
CTTNBP2NL-202ENST00000441739 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
CTTNBP2NL-202ENST00000441739 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
CTTNBP2NL-202ENST00000441739 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms