RNA–Protein interactions for RNA: ENST00000439601.1

LINC01237-204, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 569 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-204ENST00000439601 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
LINC01237-204ENST00000439601 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
LINC01237-204ENST00000439601 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
LINC01237-204ENST00000439601 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
LINC01237-204ENST00000439601 FOXD1Q16676 465 aa20.2■□□□□ 0.82
LINC01237-204ENST00000439601 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
LINC01237-204ENST00000439601 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
LINC01237-204ENST00000439601 ADRA2BP18089 450 aa19.13■□□□□ 0.65
LINC01237-204ENST00000439601 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
LINC01237-204ENST00000439601 MSH5O43196 834 aa18.83■□□□□ 0.6
LINC01237-204ENST00000439601 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
LINC01237-204ENST00000439601 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
LINC01237-204ENST00000439601 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
LINC01237-204ENST00000439601 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
LINC01237-204ENST00000439601 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
LINC01237-204ENST00000439601 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
LINC01237-204ENST00000439601 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
LINC01237-204ENST00000439601 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
LINC01237-204ENST00000439601 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
LINC01237-204ENST00000439601 KCNA4P22459 653 aa16.72■□□□□ 0.27
LINC01237-204ENST00000439601 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
LINC01237-204ENST00000439601 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
LINC01237-204ENST00000439601 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
LINC01237-204ENST00000439601 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
LINC01237-204ENST00000439601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC01237-204ENST00000439601 C1QBPQ07021 282 aaKnown RBP15.91■□□□□ 0.14
LINC01237-204ENST00000439601 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
LINC01237-204ENST00000439601 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
LINC01237-204ENST00000439601 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
LINC01237-204ENST00000439601 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
LINC01237-204ENST00000439601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
LINC01237-204ENST00000439601 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
LINC01237-204ENST00000439601 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
LINC01237-204ENST00000439601 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
LINC01237-204ENST00000439601 APLP2Q06481 763 aa15.47■□□□□ 0.07
LINC01237-204ENST00000439601 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
LINC01237-204ENST00000439601 ZBTB22O15209 634 aa15.37■□□□□ 0.05
LINC01237-204ENST00000439601 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
LINC01237-204ENST00000439601 CAPN15O75808 1086 aa15.31■□□□□ 0.04
LINC01237-204ENST00000439601 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
LINC01237-204ENST00000439601 DSG3P32926 999 aa15.18■□□□□ 0.02
LINC01237-204ENST00000439601 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
LINC01237-204ENST00000439601 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
LINC01237-204ENST00000439601 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
LINC01237-204ENST00000439601 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
LINC01237-204ENST00000439601 ATF5Q9Y2D1 282 aaPredicted RBP15□□□□□ -0.01
LINC01237-204ENST00000439601 ABCB7O75027 752 aa14.95□□□□□ -0.02
LINC01237-204ENST00000439601 POLA2Q14181 598 aa14.88□□□□□ -0.03
LINC01237-204ENST00000439601 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
LINC01237-204ENST00000439601 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
LINC01237-204ENST00000439601 FBLN2P98095 1184 aa14.48□□□□□ -0.09
LINC01237-204ENST00000439601 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
LINC01237-204ENST00000439601 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
LINC01237-204ENST00000439601 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
LINC01237-204ENST00000439601 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
LINC01237-204ENST00000439601 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
LINC01237-204ENST00000439601 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
LINC01237-204ENST00000439601 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
LINC01237-204ENST00000439601 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
LINC01237-204ENST00000439601 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
LINC01237-204ENST00000439601 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
LINC01237-204ENST00000439601 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
LINC01237-204ENST00000439601 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
LINC01237-204ENST00000439601 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
LINC01237-204ENST00000439601 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC01237-204ENST00000439601 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
LINC01237-204ENST00000439601 POTEHQ6S545 545 aa13.88□□□□□ -0.19
LINC01237-204ENST00000439601 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01237-204ENST00000439601 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
LINC01237-204ENST00000439601 PROM2Q8N271 834 aa13.73□□□□□ -0.21
LINC01237-204ENST00000439601 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
LINC01237-204ENST00000439601 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
LINC01237-204ENST00000439601 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
LINC01237-204ENST00000439601 FKBP8Q14318 412 aa13.61□□□□□ -0.23
LINC01237-204ENST00000439601 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
LINC01237-204ENST00000439601 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
LINC01237-204ENST00000439601 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
LINC01237-204ENST00000439601 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
LINC01237-204ENST00000439601 HAX1O00165 279 aa13.34□□□□□ -0.27
LINC01237-204ENST00000439601 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
LINC01237-204ENST00000439601 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
LINC01237-204ENST00000439601 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
LINC01237-204ENST00000439601 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
LINC01237-204ENST00000439601 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01237-204ENST00000439601 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
LINC01237-204ENST00000439601 MIER1Q8N108 512 aa13.21□□□□□ -0.29
LINC01237-204ENST00000439601 EVX2Q03828 476 aa13.17□□□□□ -0.3
LINC01237-204ENST00000439601 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
LINC01237-204ENST00000439601 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
LINC01237-204ENST00000439601 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
LINC01237-204ENST00000439601 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
LINC01237-204ENST00000439601 CLCN6P51797 869 aa13.07□□□□□ -0.32
LINC01237-204ENST00000439601 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
LINC01237-204ENST00000439601 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
LINC01237-204ENST00000439601 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
LINC01237-204ENST00000439601 GABBR2O75899 941 aa12.96□□□□□ -0.33
LINC01237-204ENST00000439601 NUBP1P53384 320 aa12.94□□□□□ -0.34
LINC01237-204ENST00000439601 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
LINC01237-204ENST00000439601 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
LINC01237-204ENST00000439601 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms